| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3350 |
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| Symbol | |
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| ID | 4071268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 3972096 |
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| End bp | 3974582 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637985372 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592425 |
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| Protein GI | 94970377 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACCGAG TATCCCGCGC TCTATGGTCG GTCAGTGAAG CAATTGCCGG GGATGTCCGG
CTCGCTTGGC GGCGCATGCT GCGCTCTCCG GCATTCACGC TTTGTGCCGT CATCTGCCTG
GGGCTCAGCA TCGGCAGCAC ATTCGCCATG TTCCAGGTTG TGGACGCTTT GCTTCTGCGC
AAGTTGCCCG TTCACGAACC GGACCGCCTC GTTGAGATCG CACGTTCGGA CGAAGTGAAT
CTGCATTCGC CCGAAGTCTG GCGGCTGTTC AGCGAGCGGC AAATTGTGCT GTCGAAGGTG
GCTGGGTTTG GCGAAGATAT ATATTCGGTC GCCACTCCTA ACACACAACC GCAAAAACTC
GCGGGGATTT ATGTAACCGG CTCGTACTTC CAGGCACTCG GAGTCACGCC CGTCCGCGGC
CGGGCGCTGA ACGAACTAGA CGATCGCCCT AATGCCTCTC CGGCGTGCAT ACTAAGCTTC
GCGTTCTGGC GACGCCGCTT CCAAAAATCT GACAGCGCTC TCGGGCAGCA AGTCTTTGTA
AATGGCCGGG CCTGCGAAAT CGTCGGCATT GCTCCGCAAG ACTTCTTCGG CACGGATGTC
GGATACGGGT TTGACATCGC GATCCCGTTT GCGATGCAAC GGTCACTTCG TCCTGAGGGC
ACCACGTGGC GTACGCTGTT TACGTCGCTT GCGATGTTCG GGCGACTTCG TCCAGGAGTC
TCCCTAGAGC AAGCCAATGC TCAAACGGAA GCGATCTCTC GACCTATTCT CCACAGCGCG
ATTCCGCATG ATGCTTCGGA GTCCTATCGC CGGAAGATTT CAACGATGTC TCTCATCGCG
CGACCCATGG CGAAGGGGGC CGCGTCGGAC AGCCGCTATC GCTATGGGAA CGCCGTAAAG
CTTATGCTTT GCCTTACGGG AGCTCTCTTC TTCGTCGGTT GCTTGAACCT GGCGAACCTG
ACTTTGGCTC GATCTGCATC GCGGGAGCGC GAGTTTGCCA CTCGCTACGC GCTCGGCGTC
ACACGCAGTC GACTGTTCGC CCAGCTGATG ACCGAAACGC TGGTCATCGT AGCAACGAGC
ATGCTCCTTG CAATCCCGTT GGCGTTTGGG GGCGGCCGGA CCCTGATGGC CGCCGTTTCG
TCGCACACCG ATCCGCACTA TCTCGATCTG CGGGTCGATG GTGCGTCCTT CTGCCTTTTG
TGCGGCATGA CGCTGTTTTC GGTGTTGCTG ATTGGAATCT TCCCGGCGCT CCGCGCGATT
CGTGAACCAT TCGCTCTTCA ACCGCACCGC GCCGACGCTT CCCATTCCTT CGGTCGCATC
GGACCGGACG TGCTTTCTGT GGCCATTCAG TTTGCGTTTT CGATGGCGAT GGTCGCGATC
GCCCTCGTAC TCGTGAAAAC AGTTCGGGAT CTTTCGTCTG CCGATCTCGG ATTTGATCAG
CGCTCCGTGT TGCGTGTCGA CGTGCAGCGG CTCGGTGAAG AACCCGATGG GACGCGAGAT
GAACTTGTAG CACAGCGCCT GCAGCAGCAC CTCGCGGCAG ACCACTCGAT CGTATCGATT
GGGCGAACCA AGCCGCTGCT CGATGCTTCC ACTGTTCGCA TCTCCACCAT GACTGCGAGC
GGTCGTGAGA AGCAGATCCT CGCGTACGTG GTGTACATCG ACCCCAGTTA TTTGCCGGCG
TTGCGCATTC CTGTGAGATC CGGCCGCAAC TTCGCTGCCT CTGATGACCA GGGTACAAAT
CCTGTAGCAA TCTTAAGCAG AACCGCGGCC CTGGCACTCT TCAATGAGAA TGTCGCGGGT
CCCTACACTT TCCGCCAGGC TCTTGGTAAA TCGAACCCTG AATCGGTGAC GGTGGTTGGA
GTTGCCGCCG ACGCGCAATA TGGCAAACCA AATGATCCCG CGCTGAACGT GATCTATAGG
CCAGTCGCAC AATGCGGTAC CGCCTGCGCC GGCATTGGCC AGTTTTACAT CCGTTATCAA
GGGCCGCTGG CAGTGCTTCA ACGCGAAACT GATCGGATAG CCGATGAGGT CGATTCCCGC
CTCGTACTCG ACAGCACGCC ACTCGAGCAA GAAAGCAGGT CCCTCATCCA GCAGGAGAGG
TTGACCGCAA CACTCGCCAC CATGGCCGGC AGTTTCGTTC TGATTCTCGC TGCGATCGGC
ATTTTCGGCG GGGTTTCGAT CGGCGTTGAG CGGCGCATAA AGGAGATTGG CATTCGGCTG
GCACTGGGGG CGCAGAAACG CCACGTGTAC CACACGATGC TCAGGCATAC CTCCGCGGCG
GTCCTCGCTG GAGCAATCCT GGGTGGAGTG TTCGGATTCG AAGTGATTGG CGTGGTCCGA
CAGAGTTTCT ACGGTGTCTC CGCTGCCACT CTCACGCCGC TGCTCACCAC GGCAGCATTG
CTCATTTTCG TCGCGCTCGT TGCAGGCGCG ATTCCTGTCG AACGCGCTCT GGTTTCGGAT
CCGGTTTCCA CCCTGCGCTC GGAGTAG
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| Protein sequence | MYRVSRALWS VSEAIAGDVR LAWRRMLRSP AFTLCAVICL GLSIGSTFAM FQVVDALLLR
KLPVHEPDRL VEIARSDEVN LHSPEVWRLF SERQIVLSKV AGFGEDIYSV ATPNTQPQKL
AGIYVTGSYF QALGVTPVRG RALNELDDRP NASPACILSF AFWRRRFQKS DSALGQQVFV
NGRACEIVGI APQDFFGTDV GYGFDIAIPF AMQRSLRPEG TTWRTLFTSL AMFGRLRPGV
SLEQANAQTE AISRPILHSA IPHDASESYR RKISTMSLIA RPMAKGAASD SRYRYGNAVK
LMLCLTGALF FVGCLNLANL TLARSASRER EFATRYALGV TRSRLFAQLM TETLVIVATS
MLLAIPLAFG GGRTLMAAVS SHTDPHYLDL RVDGASFCLL CGMTLFSVLL IGIFPALRAI
REPFALQPHR ADASHSFGRI GPDVLSVAIQ FAFSMAMVAI ALVLVKTVRD LSSADLGFDQ
RSVLRVDVQR LGEEPDGTRD ELVAQRLQQH LAADHSIVSI GRTKPLLDAS TVRISTMTAS
GREKQILAYV VYIDPSYLPA LRIPVRSGRN FAASDDQGTN PVAILSRTAA LALFNENVAG
PYTFRQALGK SNPESVTVVG VAADAQYGKP NDPALNVIYR PVAQCGTACA GIGQFYIRYQ
GPLAVLQRET DRIADEVDSR LVLDSTPLEQ ESRSLIQQER LTATLATMAG SFVLILAAIG
IFGGVSIGVE RRIKEIGIRL ALGAQKRHVY HTMLRHTSAA VLAGAILGGV FGFEVIGVVR
QSFYGVSAAT LTPLLTTAAL LIFVALVAGA IPVERALVSD PVSTLRSE
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