| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3345 |
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| Symbol | |
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| ID | 4071263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3967692 |
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| End bp | 3968693 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637985367 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_592420 |
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| Protein GI | 94970372 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCG CACAACACAT CCAGGTCAGC GCAGACGACG CGAACATTCG CCTGGATCAA
TATCTCGTCT CGCATCTCCC CGACGTCTCA CGCGCTCGCG TACAGGCGCT GATCGACGAC
GAAAAGATCC TGGTAGACGG AAAGTCCTCC AAGCCGTCCT ATAAGCTGCG CGGAAGCGAA
GTGATCGATG TCGTCGGCGA ATATCAGCCG CCGCCGTTGC GCGCGATTCC CGAAGATATT
CCGCTCGATG TGGTGTACGA AGACGATGAT CTCGCGGTCA TCAACAAGCC GGCAGGAATG
ATGGTGCATG TTGGCGCTGG TGCAACGGAG GAAGAGCGTA ATCGCGGGAC GCTGGTGAAT
GCGCTGCTGT ATCGGTTCCG AGCGCTGTCA GAAGTCGGCG GCGACATGCG GCCCGGTATC
GTTCACCGCT TGGACAAAGA GACCAGCGGA CTGATCGTGG TTGCGAAGAA CGACGTTGCG
CACCGCAAGC TCGCGGAACA GTTTTCCTCG CGACGGGTTC ATAAGAAGTA CGTGGCTCTG
GTGCATGGAT GGCCGAAGAA ACTGAAGGGA ACCATCAACC TGCCGATCGC GCGCGACATG
TCGCGCCGCA CGCGGATGAC GACCCGCGGG TCAGGTGGAC GCGATGCGCT GAGCCACTAC
GAAGTGAAGG AGAAGATCGA GTCTCCGTAC GGCAAGTTCG CGCTGGTCGA GGTGAAGATC
GAGACCGGCC GCACCCACCA GATCCGCGTG CATATGGCCA GTTTGGGCCA TCCGGTGGTG
GGCGACACGC TCTACGGTGC GCCGGGTGAG TTGCGGGTTA CGAAGGCGTT GAAAGGGATG
CCATCGAAGA TGGCGTCCCT GGAGCGAAAT TTCCTCCACG CGGCAGAAAT CGAATTGCAG
CAGCCCGCAA CGGGAAAAGC ACTGCGTTTT GTAACCAAAG TTCCAGCGGC ACTAGAGGAT
TTCGCTGAGA CATTGCGGCA TCCGGAAGTA CGCGGGACGT AG
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| Protein sequence | MDGAQHIQVS ADDANIRLDQ YLVSHLPDVS RARVQALIDD EKILVDGKSS KPSYKLRGSE
VIDVVGEYQP PPLRAIPEDI PLDVVYEDDD LAVINKPAGM MVHVGAGATE EERNRGTLVN
ALLYRFRALS EVGGDMRPGI VHRLDKETSG LIVVAKNDVA HRKLAEQFSS RRVHKKYVAL
VHGWPKKLKG TINLPIARDM SRRTRMTTRG SGGRDALSHY EVKEKIESPY GKFALVEVKI
ETGRTHQIRV HMASLGHPVV GDTLYGAPGE LRVTKALKGM PSKMASLERN FLHAAEIELQ
QPATGKALRF VTKVPAALED FAETLRHPEV RGT
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