| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3337 |
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| Symbol | |
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| ID | 4071255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 3958724 |
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| End bp | 3959923 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637985359 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
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| Protein accession | YP_592412 |
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| Protein GI | 94970364 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.557389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGATT ACGCGCCGCG CATGATCTCT ATCAACGCCA GCCCCGATGA GCGCTTCACG
CTGCGTGCGC TGGAACTCGC GAGCAAGGGC ATTGCCATGG CTTCGCCGAA TCCGCGCGTC
GGAGCCGTGG TTGTCAACGC CGATGGCGAA GTTATCGGCG AAGGCTTTCA CATGTACGAC
GGCCTGAAGC ACGCGGAAGT TCTCGCGCTG GAACAAGCGG GAAACGCTGC GCGCGGCGCC
ACGCTCTACT TGAACTTGGA ACCGTGTTCG CACGAGGGCC GCACCGGGCC ATGCGCGGAT
GCGGTGATCG CCGCGGGAAT CAAGCGCGTG GTGTGCTCGA TGCCGGACCC GAATCCGCTG
GTCGCTGGGC GCGGTTTCGC GAAGTTGCGC GAGGCCGGAG TCGAACTGCT CGTGGGCGTT
TTCGCTGACT ACGCGCGCAA GTTGAACGAA GGCTTCTCCA AACGCATCCG CACTGGGCTG
CCGCTGGTGA CGCTGAAGGC CGCGATGACG CTTGACGGCA AAATCGCGCC GCCTCCTGCC
GAAGTGACCG ATATCGGCTT CTCGCAGCCG GGATGGATCA CCAGCGAGAT CGCGCGCGCA
CACGTGCAGG AGCTGCGCCA TGCAGCGGAC TCCATCATGA TCGGCGTAGG CACGGTGGTC
AGCGATAATC CGCTGCTCAC CGATCGCACG GGGCTGCCAC GGCGGCGTCC GCTGCTGCGC
GTGGTGCTTG ATTCGCAATT GCGGCTGCCA CTGGATTCGC GGCTGGTGAA GACCGCGCAT
CATGATGTGC TCGTCTTCTG CTCATTTGCG GAAGAGAAGA AGCGCGCGGC GCTGGAAGAA
CGCGGCATTC AAGTGGAACA AGTGCCGCTC GCGAAGAACG AACCCGGTGG AGTTGCCGTT
GCCGGCGGGC GTCCGGATTT GAATGCCGTC GTGGAACGAC TAGGCGCGCG CGAGTTGAAT
AGCCTCATCG TTGAAGGCGG CGCGGCGGTG AACTGGGCTG CGTTGGCTGC GGGCATCGTG
GACAAAGTTT TCTTGTATTA CGCGCCGAAG ATTCTCGGTG GCGGCAATGC CGTCCCGTTC
GCACTGGGAC CGGGATACGC CCGCATGGAT GAGGCCGCGT ATTTGCGCAA TCTCGAACTG
CACCGCTTCG GCGAGGACTT CGCAGTCGAA GGGTATTTGC GCGATCCTTA CAGCGACTGA
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| Protein sequence | MPDYAPRMIS INASPDERFT LRALELASKG IAMASPNPRV GAVVVNADGE VIGEGFHMYD
GLKHAEVLAL EQAGNAARGA TLYLNLEPCS HEGRTGPCAD AVIAAGIKRV VCSMPDPNPL
VAGRGFAKLR EAGVELLVGV FADYARKLNE GFSKRIRTGL PLVTLKAAMT LDGKIAPPPA
EVTDIGFSQP GWITSEIARA HVQELRHAAD SIMIGVGTVV SDNPLLTDRT GLPRRRPLLR
VVLDSQLRLP LDSRLVKTAH HDVLVFCSFA EEKKRAALEE RGIQVEQVPL AKNEPGGVAV
AGGRPDLNAV VERLGARELN SLIVEGGAAV NWAALAAGIV DKVFLYYAPK ILGGGNAVPF
ALGPGYARMD EAAYLRNLEL HRFGEDFAVE GYLRDPYSD
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