Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3274 |
Symbol | |
ID | 4072686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3878707 |
End bp | 3880110 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637985295 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_592349 |
Protein GI | 94970301 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0156688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGGG AAAAAGTTTT AATCGTAGAA GACGAGGAGC ACGCACGTAC CGGGCTCGCC GAGCTGGTGG AATCGTGGGG TTACGCCACG GAAACCGCGG AAGACGGCCT CGATGCTCTC GACAAAGTCA CCACCTTCGC TCCAGCAATC GTCATCACTG ACCTAAAGAT GCCCCGCATG GACGGCCTTG GCCTCCTCCA GGAACTCGGA AATCATCCGG AGTCGCTCGC CGTCGTGGTG CTCACCGGGC AAGGCGATGT GGGTGTGGCC GTGACGGCGA TGAAAAGCGG CGCCTACGAT TTCATCGAAA AACCCGTAGA TGCGGCACGT TTGCGCAACA TCCTGGTGAA TGCGTCGAAG CAGCAGGACG CCGAGCGCGA ACTGGAAGTC ACGCGCCGCA AGTTGCGCGA CACTGGACTG CTCGGGTCAT TGGTTGGAAC GTCGAAAAAG ATGCAGGAGA TCTTTCGTCT GATCGAAATG GTCGCGCCGT CCACTGCATC TGTGCTCATC ACCGGCGAGA GTGGAACCGG CAAAGAGATG GTCGCGCGGA CGATCCATGA ATTAAGCCCG CGCAAAGTCA AGCCGTTTGT CGCGATCAAT TGCGCGGCAA TTCCGGAGAG CCTGATCGAA AGCGAAATCT TCGGCCACGA AAAAGGCGCG TTTACCGGCG CGCTCGAGCG TCGCACCGGC TGCTTCGAAC TCGCAGAAGG TGGAACGCTG CTACTCGACG AGATCGGCGA AATGCCGGTC GCGACGCAGG CGAAACTGCT CCGTGTTCTT GAGGACCGCA AGCTACGAAG GCTCGGCAGT AAAACAGAAA CCTCGATTGA CGTTCGCGTC CTCGCAGCGA CGAACAAGGT CCCGGAAGAA GCAGTTGCGT CAGGACAATT GCGCAACGAT CTCTACTATC GGCTGAATGT CTTCAACATC CACATGCCGC CGTTGCGCGA TCACAAAGAC GACCTTCCCG CGCTGGTGCA ATTCCTGTTG CAAGACATGA ATGCGAAGCA CGGCCGCAGC GTTTCCGGCG TCGCCGACGA AGTGAACAAG GCGTTCCAAG GCTATGCCTG GCCGGGCAAC GTCCGCGAAT TACGCAACGC GCTGGAGCGT GCGGTAATTC TTTGCGAGAG CCGCGTGGTT GAACCCAAGC ACCTGCCGCC CGGATTCGGC AACGTGATTC CACGCGCGCC CGTGCAAGAA GCGAATGGCA TCCGGCTTGG CGTCGGGACG ACGGTGGAAG AGGCAGAGAA ACTGTTGATC CTCAAGACGC TGGAGTCCAC GAACAATAAC AAGACGCGGG CCGCGGAAAT CCTCGGGATC AGCCTGAAGA CGCTGCACAA TAAGCTGAAA GAGTACGGCC AGAACAGTGC CGCGACGGCC GCGGCCGAGG CGGCGAACTC CTGA
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Protein sequence | MSREKVLIVE DEEHARTGLA ELVESWGYAT ETAEDGLDAL DKVTTFAPAI VITDLKMPRM DGLGLLQELG NHPESLAVVV LTGQGDVGVA VTAMKSGAYD FIEKPVDAAR LRNILVNASK QQDAERELEV TRRKLRDTGL LGSLVGTSKK MQEIFRLIEM VAPSTASVLI TGESGTGKEM VARTIHELSP RKVKPFVAIN CAAIPESLIE SEIFGHEKGA FTGALERRTG CFELAEGGTL LLDEIGEMPV ATQAKLLRVL EDRKLRRLGS KTETSIDVRV LAATNKVPEE AVASGQLRND LYYRLNVFNI HMPPLRDHKD DLPALVQFLL QDMNAKHGRS VSGVADEVNK AFQGYAWPGN VRELRNALER AVILCESRVV EPKHLPPGFG NVIPRAPVQE ANGIRLGVGT TVEEAEKLLI LKTLESTNNN KTRAAEILGI SLKTLHNKLK EYGQNSAATA AAEAANS
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