Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3225 |
Symbol | |
ID | 4072560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3818843 |
End bp | 3819877 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637985246 |
Product | abortive infection protein |
Protein accession | YP_592300 |
Protein GI | 94970252 |
COG category | [R] General function prediction only |
COG ID | [COG1266] Predicted metal-dependent membrane protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0165135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0503949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCCC AATTTCCTCC CGACCAACCG ATCGAAATCT CACCACAGTC GCCAACGCTC GATCCTGTGC TCGCACCTCC ACCTCCTCCG CGCACGAACG CCTTCATCGG CCCGAACGGC CTGCGCGCGG GCTGGAAGTG GCTGATTTTC TTTCTCATCT TCTGTGCCCT TATCTTCGGC ATGGCTATGG TGGTGCGCTT GTTCATTCCC AGGTACACCC CCAACGATCG CAACCTAAAA GTCATGTTTG CGTTTGAAGT CATCCAGGCC GCGTGTGTGC TGCTCGCAAC CGGCATCATG GCTAAACTCA TCGACAAGAA GAAGTGGGGC TACTTCGGTC TCCCGCTCTC GCGTGCGTTC AACATCGAGT TCTGGTACGG AGCGATCGTG GGTTTCGGTG CGCTCGCGGT CCAGCTCGAA ATCATGCATC TCGGCGGCTG GTTCGATTTC GGGCCGGTTG TACTGCATGG AGCCACTGCC CTGAAATTCG GCCTGTTCTG GGGCGCGTTC TTCCTCTGCG TCGGTCTTTT TGAAGAAGGC TTCCTGCGCG GCTACCCGCA GCGTGTGCTC ACCAATGGCA TGGGTTTCTG GCCGTCAGCC TTGTTGCTCT CTTTGCTCTT CGCCGGGCTG CACGTCGGCA ACAAAGGCGA GAACCCCTTC GGCATCTTCA TGGTCTTTGT GGACGGCATG GTGATGTGCT TCACCTTGTG GCGTACCGGA ACCATGTGGT TCGCCGTCGG CAACCACGCC GCGTGGGACT GGGCGCAGAC CTACTTCTTC GGCACGCCCG ACAGCGGTAT GAAACCGATC GGCGCGCTCT TGTCGCCGTC GTTCCACGGC CCAACGCTCC TCAGCGGCGG CAATGCCGGT CCAGAAGGCA GCGTGCTCGT GCTTCTTTCG GAAACATTGA TCGCGGTGTC GGTTGCGGTG GTCTATCGCG AAAGGAAATA TCCGCTGCAA GAAGATGAAG CGCCCGCACA GCCTTCACCG GAGATCACGC CGACCATTGC GCCTTCGGCT TTTCCTACCG CGTAG
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Protein sequence | MDPQFPPDQP IEISPQSPTL DPVLAPPPPP RTNAFIGPNG LRAGWKWLIF FLIFCALIFG MAMVVRLFIP RYTPNDRNLK VMFAFEVIQA ACVLLATGIM AKLIDKKKWG YFGLPLSRAF NIEFWYGAIV GFGALAVQLE IMHLGGWFDF GPVVLHGATA LKFGLFWGAF FLCVGLFEEG FLRGYPQRVL TNGMGFWPSA LLLSLLFAGL HVGNKGENPF GIFMVFVDGM VMCFTLWRTG TMWFAVGNHA AWDWAQTYFF GTPDSGMKPI GALLSPSFHG PTLLSGGNAG PEGSVLVLLS ETLIAVSVAV VYRERKYPLQ EDEAPAQPSP EITPTIAPSA FPTA
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