| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3078 |
|---|
| Symbol | |
|---|
| ID | 4072642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3657644 |
|---|
| End bp | 3659332 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637985097 |
|---|
| Product | gamma-glutamyltransferase 2 |
|---|
| Protein accession | YP_592153 |
|---|
| Protein GI | 94970105 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.588204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACA AGAGTTTGAT ACTAGCGGTT CTTCTCCTTT CACTCGTTCC CTGCGTGTGG
CCCCAGGCCA CGAAAGCGCC GTTCCTCTCG CGCCATGCGA GTATCGCTGC CGGCAGCCAC
GGCGTGGTTG TTTCCGGCAA GCCTGCCGCC ACAGCCGCCG GCATCAAGAT TCTGCAGCAA
GGCGGAAACG CCGCCGACGC TGGTGCCGCT ACTCTGCTGG CGCTGTCTGT CACCTCAGTA
GGTGCGTTCT GCGTGGGAGG AGAAATCCCC ATCCTGGTTT ATAGCGCGGA TCAAAAAAGC
GTGAAGCTGC TGGAGGGACA AGGCGAGGCC CCACGCGATC CCAAAGCGAT CGCATGGTAC
ATGAAGCATG GAATCCCGGA CGGTGATGTC AAAGCCGCCG CTGTACCTGG CACCATCGAT
GCGATCGTCA CCCTGCTGAA GCTCTACGGA ACAAAAAGCT TCGAGGAGGT CGTACAGCCG
ACGCTGGCCA TTCTGGATGC CGGCGGTCCT ACTTGGTATA TCGATACCGG CAGCGGCGAG
CGGATCGAAA CGGGCGTGCA CTGGCAGGCT GACCTGGCCG TGACTTATCG CAAATTGGTG
GACTCGGAAA AGGCCGCGAA AGGTACGCGG CAGCAGAAAT TGCAGGCAGT CTCGGATCGC
TTCTATCGCG GCGATATCGC TGACGCCCTG GAAGCCTGGT ATATCGAAAA GGGCGGATTC
CTGCGCAAGC AGGATTTGGC CGCGCACAAG ACTCCGGTCG TGGATCCGCT CAAAACCACA
TATCGCGGCT ACGAGGTATA TAAGGCTGGT CCTCTGACGC AGGGTCCATA TCTCTCCCAG
ACACTGCGGC TGTTGGAAGG TTTCGACCTG AAGAAGATGG GCTTCAATTC GGCGGATTAC
ATCCACACGG TGATTGAAGC GGAGAAGCTG GCGCTGGCCG ACCGCGATGA GTATTACGGC
GATCCGAACT ACGCGAAAGT GCCGATGCAA TTGTTGCTCT CAGATCAGTA CACCAATATG
CGACGCGAGC TGATCGATCC GAAGCGGGCA TCTCTCGAGC TCCGGCCCGG CGATCCTTAC
AATATGAAAG CGACCAGGCC GCCCACGATC ACCGGTCCAT GGCATGGAGG AACCACGGTG
ATGTGTGTAA CAGACAAATT TGGCAACGTC ATCGCGGCGA CTCCGAGCGG GCTGTCGAGC
ACAGCGGGCG TGGCCGGACG CACAGGTATC ATTCATGGAA GCCGGCTCAG CAGCCTGAAC
ACATTTGCCG GAACTCCCAA CGTCATCCAA GCTGGCAAAC GGCCACGAAT CACGCTGAGC
CCCACGCTGC TTTTCCGTGA CAACCACCCG GTGATGGCGA TCTCCGTAGC GGGCGGCGAT
CAGCAGGATC AGGCGGCCAT CCAGGTCATC CTTGACTACG TGGAATTCGG CATGAAGCCC
GAGGAGGCGT TTAGCGCGCC TCGCTTCTCC ACCACGCATT TCATCAGTTC CTTCAGCCAG
GAGCGCGCCG AGTTGGGCAG CCTGTCTCTC CCGAACGCTC TGCCTGAAGA AGTGCAGGCC
GATCTGAGGG CTCGCGGGCA CGTGATTACC ATGAGCCGCG AAGCAGTAGG TGGAGTGGCG
CTGATCGGCA TTGACCCCAA GGCCAAACAG GCTACAGCCG TGGGCCCGGC CGCCGGCGAG
ATGGAATAG
|
|---|
| Protein sequence | MRNKSLILAV LLLSLVPCVW PQATKAPFLS RHASIAAGSH GVVVSGKPAA TAAGIKILQQ
GGNAADAGAA TLLALSVTSV GAFCVGGEIP ILVYSADQKS VKLLEGQGEA PRDPKAIAWY
MKHGIPDGDV KAAAVPGTID AIVTLLKLYG TKSFEEVVQP TLAILDAGGP TWYIDTGSGE
RIETGVHWQA DLAVTYRKLV DSEKAAKGTR QQKLQAVSDR FYRGDIADAL EAWYIEKGGF
LRKQDLAAHK TPVVDPLKTT YRGYEVYKAG PLTQGPYLSQ TLRLLEGFDL KKMGFNSADY
IHTVIEAEKL ALADRDEYYG DPNYAKVPMQ LLLSDQYTNM RRELIDPKRA SLELRPGDPY
NMKATRPPTI TGPWHGGTTV MCVTDKFGNV IAATPSGLSS TAGVAGRTGI IHGSRLSSLN
TFAGTPNVIQ AGKRPRITLS PTLLFRDNHP VMAISVAGGD QQDQAAIQVI LDYVEFGMKP
EEAFSAPRFS TTHFISSFSQ ERAELGSLSL PNALPEEVQA DLRARGHVIT MSREAVGGVA
LIGIDPKAKQ ATAVGPAAGE ME
|
|---|
| |