| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3011 |
|---|
| Symbol | |
|---|
| ID | 4071566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3570182 |
|---|
| End bp | 3571234 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637985030 |
|---|
| Product | phosphoribosylformylglycinamidine cyclo-ligase |
|---|
| Protein accession | YP_592086 |
|---|
| Protein GI | 94970038 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000165502 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGACTCAAG CCGACATGGA TACCAAGCCC GTTACGTACG CCGACGCCGG CGTTGATATT
GAAAAAGCCA ACCGCACCAA GCAGCGCATT AAGTATTTGG CGCACAAGAC GTTCACCAAG
AGCGTCCTGA GCGAGATTGG CGGCTTTGGC GGCCTTTTCC AGATCGATAA AAAGAAGTAC
CTGGACCCGG TGCTCGTTTC GAGCGTGGAC GGCGTAGGCA CGAAGCTGAA AATCGCATTC
GAAATGAACC TTCACCACAC GATTGGTGCG GACCTGGTCA ACCATTGCGT GAACGACATC
GCGGTGCAGG GCGCGGCGCC GATGTTCTTC ATGGACTACC TGGCAACCGG CAAACTGGAT
CCGGACATTG CGGAGAGGAT CGTTACCGGG CTCGCGGATG CTTGCAAGCA CAATGGCTGC
GCGCTGATCG GCGGCGAGAC GGCCGAGATG CCGGGCTTCT ATCCCGACGG CGAATACGAT
CTCGCTGGAT TCATCGTGGG AGTGGTCGAA CGCGATAAGG TCATCACTGG CAAAGAGGTT
GTGCCGGGAG ATGTGCTGGT CGGGCTGCCG TCGAATGGGC TGCATACGAA CGGATATTCG
CTCGCCCGGA AACTGCTCTT CTCCATCGCC GGATACTCGC CCGAAACGTA TGTAAATGCG
ATTAAAGGCA AGGTCGGCAA CGAGCTGATG AAGACGCACA AGAGCTACTG GCCTGCGGTC
CGTCGGCTGG TGGAGGCGGA GTGCGTAAGC GCGATGGCAC ACATTACAGG CGGCGGCATT
ACCGAGAACC TGCCGCGCGT GCTGCCCAAG GGCACGGGCG CGGTGGTGGA ACTGGGATCG
TGGCCGGTGC TGCCGATCTT TACCCACATG CAGCAGCTCG GGAATATCAG CCAGGACGAG
ATGCTCCGCA CCTTCAACAT GGGTATCGGG ATGGTGCTGG TGATTCCGGC GAAGAAGTTC
AAGAAGGTAC AGACAGTGCT GGAGCGCGCT GGGGAGAAGG GCTATACGAT CGGGCGCATT
GTGAAGGGCG ACCGAAAAGT CAGCTACTCG TAA
|
|---|
| Protein sequence | MTQADMDTKP VTYADAGVDI EKANRTKQRI KYLAHKTFTK SVLSEIGGFG GLFQIDKKKY
LDPVLVSSVD GVGTKLKIAF EMNLHHTIGA DLVNHCVNDI AVQGAAPMFF MDYLATGKLD
PDIAERIVTG LADACKHNGC ALIGGETAEM PGFYPDGEYD LAGFIVGVVE RDKVITGKEV
VPGDVLVGLP SNGLHTNGYS LARKLLFSIA GYSPETYVNA IKGKVGNELM KTHKSYWPAV
RRLVEAECVS AMAHITGGGI TENLPRVLPK GTGAVVELGS WPVLPIFTHM QQLGNISQDE
MLRTFNMGIG MVLVIPAKKF KKVQTVLERA GEKGYTIGRI VKGDRKVSYS
|
|---|
| |