| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2997 |
|---|
| Symbol | |
|---|
| ID | 4071552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3550376 |
|---|
| End bp | 3551218 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637985016 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_592072 |
|---|
| Protein GI | 94970024 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00100576 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCC CGCTGCTCGC AGTGAGCGCG GCGATTGCCC AGCCGCCTGC GGCGTTCATG
GAGAAACAAA ATTCGGGCCC CGCATCGCAA GTCGATCCTG CCAGCCTCAA GGACATCGGT
ATCGACCAGC ACCTCGACAC GCAGATTCCT CTCGACCTTC AATTCAAGGA CGAGAACGGC
AACATCGTGA AACTCGGCGA CTACTTCAAG AAGGGCCGCC CCGTCATCCT CACGATGGTC
TATTACCAGT GCCCCATGCT GTGCAGCGAG GTCCTGCAAG GGCTCAACAG CGCTCTACAG
ACCATGACGT TCAGTGCGGG CAATCAGTTT GAAGTCATCA CCGTCAGCAT CGATCCGCGC
GATACGCCTG AACTCGCGAA AGAGAAGAAG GCCAGCTTCC TGAAGGAATA CAACCGGCCC
GGGGCCGAAG ATGGCTGGCA CTTCCTCACC GTGAACGATC CGAAGGATGT CGCCAAGCTC
GCGAATGTCG TGGGTTGGAA GTACCGCTGG GATCCCAAGA TGCAGCAGTT CATTCACGCT
GCCGGCATCA TGATCGTGAC CCCGCAGGGC AAGCTCGCGC AGTACTACTA CGGAATCGAA
TACGCACCCA AGGATTTGCG TCTCGGCCTC GTCGAGGCGT CGCAGGACAA GATTGGAAAC
CTCGTGGACA AAGTGGTTCT GTATTGCTAC CACTACGATC CACACACCGG AAAATACGGC
GCTGTTGTTG CGAATTTGTT GCGCATCTTC GGCGCCGCAA CCGTTTTGCT ATTAGGGGGC
TTTATCGTGC TGATGGTTCG CCGTGACTCG CACGCTGGCC GCCATGAGAC AGGACAGGCC
TGA
|
|---|
| Protein sequence | MALPLLAVSA AIAQPPAAFM EKQNSGPASQ VDPASLKDIG IDQHLDTQIP LDLQFKDENG
NIVKLGDYFK KGRPVILTMV YYQCPMLCSE VLQGLNSALQ TMTFSAGNQF EVITVSIDPR
DTPELAKEKK ASFLKEYNRP GAEDGWHFLT VNDPKDVAKL ANVVGWKYRW DPKMQQFIHA
AGIMIVTPQG KLAQYYYGIE YAPKDLRLGL VEASQDKIGN LVDKVVLYCY HYDPHTGKYG
AVVANLLRIF GAATVLLLGG FIVLMVRRDS HAGRHETGQA
|
|---|
| |