| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2986 |
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| Symbol | |
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| ID | 4068887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 3536501 |
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| End bp | 3537307 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637985005 |
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| Product | MIP family channel protein |
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| Protein accession | YP_592061 |
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| Protein GI | 94970013 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.862108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTAA ATTTCGATAC AACGCCGATG ACCGCACGAA CGACACTCGC CGCCGAACTC
CTTGCTGAAT TTTTGGGGAC GCTGGTCCTG ATTCTGTTTG GGACTGGCGT CGTCGCCATG
GTGCAGCTGT TCCCTTCTGC ACACCCCGGA GAAACCATTA ACGGCGGCTA TACCAACATT
ACGATCGGCT GGGGGCTGGC GGTCACGATG GGGATGTACA TCGCGGCGCG GGTTTCCGGC
GCGCACTTGA ACCCGGCGGT GACGCTGGCG CTGGCAGTGT TCCGCGGATT TCCCTGGCGC
AAGGTAGTTC CCTACTCTCT GGTGCAAACG GCGGGAGCGT TCGTAGCCGC GGCGATCGTC
TACCTGAACT ATCTGCCGGC ATTTCACAAA GTCGATCCGG GGCTGGCGCG CACGGCGGGC
GTGTTCACTA CGTTTCCGGC GTTCGGAGAG ATTCCCTTGG CGGGGTTCCT GGATCAATTG
ATCGGCACAG CGTTGCTGCT GCTGATGATC TTTGCGATCA CCGATGAGCG GAACATGCCG
CCGCAATCTA ACCTGACGCC GCTGATGATC GGGCTCGTGG TGGTGGCGAT TGGCATGAGC
TTTGGAGCGA TGCACGGGTA TGCGATCAAT CCGGCGCGCG ACTTTGGACC GCGGCTGTTC
ACAGTAGTCG CGGGATTCCG GCAGAACGGA ATTACCGATG GAAGCAGGGT GTGGTGGATT
CCGATTGTCG CGCCGCTGCT TGGCGGGGTG ATTGGGGCTG CGATTTACGA TTTCGGTGTC
AGGCCGTTTC TACCTTCCTC GAAATAA
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| Protein sequence | MAVNFDTTPM TARTTLAAEL LAEFLGTLVL ILFGTGVVAM VQLFPSAHPG ETINGGYTNI
TIGWGLAVTM GMYIAARVSG AHLNPAVTLA LAVFRGFPWR KVVPYSLVQT AGAFVAAAIV
YLNYLPAFHK VDPGLARTAG VFTTFPAFGE IPLAGFLDQL IGTALLLLMI FAITDERNMP
PQSNLTPLMI GLVVVAIGMS FGAMHGYAIN PARDFGPRLF TVVAGFRQNG ITDGSRVWWI
PIVAPLLGGV IGAAIYDFGV RPFLPSSK
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