| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2985 |
|---|
| Symbol | |
|---|
| ID | 4068886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3535459 |
|---|
| End bp | 3536424 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637985004 |
|---|
| Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
|---|
| Protein accession | YP_592060 |
|---|
| Protein GI | 94970012 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
[COG2203] FOG: GAF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.369432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGCA ACGAATCCGA ACGGCTGAAA GCGCTGCGTC AGTACAAAAT CCTCGACACC
CAGCCCGAGC AGGCATTCGA CGATCTCGCC CTCATCGCCT CCCACATCTG CGAAACTCCC
ATAGCGCTCA TCACCCTGGT AGACGAAGAT CGCCAGTGGT TCAAGTCCCG CATCGGCATC
GACGTACAGG AGACCGCGCG CAGTATCTCT TTCTGCTCGC ACGCCATCGA GCAAAAGGGC
GTCTTCACCG TGCCCGATGC CACCCTCGAT CCTCGCTTCC GCGACAATCC TGTCGTGAAA
GGTGAGCCTC ACATCCGTTT TTATGCTGGA GCTCCTCTTG CTTCTCGCGA TGGTTATGCC
CTGGGAACTC TCTGTGTAAT CGACTACGTC CCACGCACCC TGACGCCTGA ACAAAAGAAT
GCGCTCACAG CGTTGGAACG CCAGGTCGCG GCCCAGCTCG AACTGCGCCG CAATCTCGAG
GAACTTCGGG TCGCGCTCGA AGGCATCGAG AACCTCAGCG CGATGATCCC CTATTGCTCC
ACCTGCCAGA TGAACATCGT GATCCCCGCC GATCCCGAAG ACATGAAGAA AATCAGCGCC
GGGGTCGTAG AACTCCTCAA TAACAAACGA TGGACGCAAA GCGAAATCGC CGACGTTCAA
CTCGCGCTCG ACGAGGCCCT CATCAACGCC ATCCGCTATG GTTGCAACAA CGATCGCAGC
AAGCACGTGC AGTGCTGCGT CACCTTCGAC GACTCCGGTG AATTGGTCGT AGTGATCAAG
GACCCGGGCC CCGGGTTCGA CGTCAAAGCC GTGCCGAACC CTTTGGAGGG CGAAGGCTTG
TTCCGCGGCA GCGGCCGCGG CGTTTTCCTC ATCAACAAAT TAATGGATAC GGTCGAATAT
GCAGACCAGG GCAGCAAGGT GCTGATGCGC AAACGTCCCG AAGCTTCACT GTCCCCCTCG
CAATAA
|
|---|
| Protein sequence | MPSNESERLK ALRQYKILDT QPEQAFDDLA LIASHICETP IALITLVDED RQWFKSRIGI
DVQETARSIS FCSHAIEQKG VFTVPDATLD PRFRDNPVVK GEPHIRFYAG APLASRDGYA
LGTLCVIDYV PRTLTPEQKN ALTALERQVA AQLELRRNLE ELRVALEGIE NLSAMIPYCS
TCQMNIVIPA DPEDMKKISA GVVELLNNKR WTQSEIADVQ LALDEALINA IRYGCNNDRS
KHVQCCVTFD DSGELVVVIK DPGPGFDVKA VPNPLEGEGL FRGSGRGVFL INKLMDTVEY
ADQGSKVLMR KRPEASLSPS Q
|
|---|
| |