Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2882 |
Symbol | |
ID | 4071183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3424909 |
End bp | 3426102 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637984900 |
Product | putative signal transduction protein |
Protein accession | YP_591957 |
Protein GI | 94969909 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.567941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCG TAGTGCGGCA GCCGATCTTC GATTACCGGG AGCAGGTCGA GGGATATTTC CTGAATATCG AGAAGCCTAC CGGCGGATTG GTGGATACGG TGTCGGAGGT GGCGGCGATT ACGGTGGCGC TGGACCGGAT CCCGCGGCAT TCCTGGGCGA TGGTGGAGTG CGGCGTGCAG GTGCTGGCGA GTATGGCGGT GCGGCGATTG CCGATGGGAC GAGTGGTGTT GGCGATCAGT TCGGACGAGT ACGCTTCGGC GGAGATGTTG CGCTGCGTGA GGGAGCTTCG CCGGGAGGGC TTCACGTTTG CGATTGCTGA TTTCGAGGCC AACCGCGAAT GGGAACCTTA CTTGCCTTTC ATGGATTGGG TGGCGGTCCG AGGGAGCTCG CTGTTGTGCA AAATGAAGAA AAATCTGGCG GCGGGGAAGG CGCGCAATGC GCGGATGATC GCGCGCAATC TTGATACGCG AAGCGATCTT GCGGCAGCTG ACAATTGCGG GTTTCGCTAC TTCGAGGGTG CGTATTACCT GTCGTCTGCC CAGGAATTGG CGCGCGAGGT TCCACCGGCA AAGCTGGCGT GTTTGCGGCT GCTGACGGAA CTCCAGAGGC CAGTGTTGCA TTATGCGGTG ATCGAGAATC TGATCAAGGC GGAACCGTCA TTCTGTTACC GGTTCATGCG GTACATGAAT TCGTCAGCGT TCTTTGGGGT GCAGAAGGTG ACGGGCATCC GGCATGCGAT GAGCCTTCTC GGAGATGACG AGTTGCGGCG TTGGTTGTCG TTGATGGCCA CGGTTGCCGC GGTGGACGGA AGGCCGACGG AAGTGGTGGT CTGCGCGATG CTGCGGGCGC GGTTATGTGA GTTGTTGTCG CCCGACGCGC CGGACGCAGG GTTCATGACC GGCCTGTTCT CGCTCATGCC GCTGGTGGTC AACATGCAAT TGAGCGCGCT GTTGAGTGTG GTGCGGCTGC CTCAGGCGGT GGAGCGGGCT TTGTGGGGAG AGCCGGGAGC GCTGCGGGCG CTGCTCGACC TTGCCGTGGC GTTTGAGCGG GCGCGATGGA ACATGGTTCA CGACCTCGCG CATGGATTGG GGATCACCGA CGAGCGGGTG TTTGCGGCGC GCGGTGATGC GTCGCGGTGG ACCAACGGGA TTCTCGCCAC CCAGGCGGCT CCGGCGAACG CCATGACGGC GTGA
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Protein sequence | MRFVVRQPIF DYREQVEGYF LNIEKPTGGL VDTVSEVAAI TVALDRIPRH SWAMVECGVQ VLASMAVRRL PMGRVVLAIS SDEYASAEML RCVRELRREG FTFAIADFEA NREWEPYLPF MDWVAVRGSS LLCKMKKNLA AGKARNARMI ARNLDTRSDL AAADNCGFRY FEGAYYLSSA QELAREVPPA KLACLRLLTE LQRPVLHYAV IENLIKAEPS FCYRFMRYMN SSAFFGVQKV TGIRHAMSLL GDDELRRWLS LMATVAAVDG RPTEVVVCAM LRARLCELLS PDAPDAGFMT GLFSLMPLVV NMQLSALLSV VRLPQAVERA LWGEPGALRA LLDLAVAFER ARWNMVHDLA HGLGITDERV FAARGDASRW TNGILATQAA PANAMTA
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