Gene Acid345_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2821 
Symbol 
ID4071824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3350850 
End bp3351563 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content60% 
IMG OID637984839 
ProductABC transporter, ATPase subunit 
Protein accessionYP_591896 
Protein GI94969848 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.341071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCGG CTGGCCGCGA GAATCTCATG CCGGAATCGA TTCTGAGAAC CGAAGAACTG 
GGGTACAGCG TTGGCGACAA GGTGATCGTC GACGCTGTAT CGCTCACGGT CGCGCAAGGC
GAGGTGCTTT GCGTGCTCGG GCCGAGCGGC TCGGGCAAGA GTTCGTTTCT GCGTTTGCTG
AACCGGTTGG CTGAACCGAC GAGTGGCATG GTGTATCTCG AGGGGAAGGA TTATCGCGAG
CTCGCGCCGC GGGAGTTGCG ACGACGCGTG GGGATGATTA CGCAGCAGGC GTTTCTCTTC
CCTGGCAGAG TTGCAGAGAA TGTGCGATTT GGACCCAGGC AACGTGGGCA GGAGATAACG
GACGACGCTG TCGAAGAATG TCTGCGGGGC GTGGGACTTA GCGGATATGG TTCGCGACAA
GGTTCTACGC TCTCTGGCGG CGAGGCGCAG CGCGTGTCGA TCGCGCGCGC ATTAGCCAAT
GAACCTGTGG TGTTGCTGGC GGATGAACCG ACTTCAGCGC TGGATGATTT CTCGAAAAGC
GGAATTGAGG CGTTGCTGCG CGAGATTGTG AAGGCGCGCC AATTGACGTG CGTGATGGTG
ACGCATGACG TAGCGCAGGC GCGGCGTATG GCGGACCGTG TCGCGTTGTT TCGCGGTGGA
CGAGTAGTGG GCTTGGGAAC CTTGGCGGAG GTGTTGGATG AACCTGCATC TTGA
 
Protein sequence
MSSAGRENLM PESILRTEEL GYSVGDKVIV DAVSLTVAQG EVLCVLGPSG SGKSSFLRLL 
NRLAEPTSGM VYLEGKDYRE LAPRELRRRV GMITQQAFLF PGRVAENVRF GPRQRGQEIT
DDAVEECLRG VGLSGYGSRQ GSTLSGGEAQ RVSIARALAN EPVVLLADEP TSALDDFSKS
GIEALLREIV KARQLTCVMV THDVAQARRM ADRVALFRGG RVVGLGTLAE VLDEPAS