Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2821 |
Symbol | |
ID | 4071824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3350850 |
End bp | 3351563 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637984839 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_591896 |
Protein GI | 94969848 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.341071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTCGG CTGGCCGCGA GAATCTCATG CCGGAATCGA TTCTGAGAAC CGAAGAACTG GGGTACAGCG TTGGCGACAA GGTGATCGTC GACGCTGTAT CGCTCACGGT CGCGCAAGGC GAGGTGCTTT GCGTGCTCGG GCCGAGCGGC TCGGGCAAGA GTTCGTTTCT GCGTTTGCTG AACCGGTTGG CTGAACCGAC GAGTGGCATG GTGTATCTCG AGGGGAAGGA TTATCGCGAG CTCGCGCCGC GGGAGTTGCG ACGACGCGTG GGGATGATTA CGCAGCAGGC GTTTCTCTTC CCTGGCAGAG TTGCAGAGAA TGTGCGATTT GGACCCAGGC AACGTGGGCA GGAGATAACG GACGACGCTG TCGAAGAATG TCTGCGGGGC GTGGGACTTA GCGGATATGG TTCGCGACAA GGTTCTACGC TCTCTGGCGG CGAGGCGCAG CGCGTGTCGA TCGCGCGCGC ATTAGCCAAT GAACCTGTGG TGTTGCTGGC GGATGAACCG ACTTCAGCGC TGGATGATTT CTCGAAAAGC GGAATTGAGG CGTTGCTGCG CGAGATTGTG AAGGCGCGCC AATTGACGTG CGTGATGGTG ACGCATGACG TAGCGCAGGC GCGGCGTATG GCGGACCGTG TCGCGTTGTT TCGCGGTGGA CGAGTAGTGG GCTTGGGAAC CTTGGCGGAG GTGTTGGATG AACCTGCATC TTGA
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Protein sequence | MSSAGRENLM PESILRTEEL GYSVGDKVIV DAVSLTVAQG EVLCVLGPSG SGKSSFLRLL NRLAEPTSGM VYLEGKDYRE LAPRELRRRV GMITQQAFLF PGRVAENVRF GPRQRGQEIT DDAVEECLRG VGLSGYGSRQ GSTLSGGEAQ RVSIARALAN EPVVLLADEP TSALDDFSKS GIEALLREIV KARQLTCVMV THDVAQARRM ADRVALFRGG RVVGLGTLAE VLDEPAS
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