Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2791 |
Symbol | |
ID | 4072414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3303505 |
End bp | 3305352 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637984809 |
Product | dihydrolipoamide acetyltransferase |
Protein accession | YP_591866 |
Protein GI | 94969818 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.319819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCACAGG AATTTAAACT CCCCGAACTG GGTGAGAATA TTGCCAGCGG CGACCTGGTT CGTGTGATGG TGAAGCCCGG CGACACCGTC AAGGAAGGCC AGCCTGTGAT CGAACTCGAG ACGGACAAGG CCGTCATCGA AGTTCCTTCC ACCGTCAGCG GCAAGGTACA GGAAGTCAAA GTCCAAAAAG GCCAGAAGCT GAAAGTCGGC GCCATCATCT TCACCTATGG CGACGGCGCG GCCGCCGCCC CGGTGCAGCC CGCGGCTCCT GCAAAGACCG AAGACAAACC CAAGGCCGAG CCTAAGGCTG AAGCACCCAA GCAAGCTGCG CCTTCTGCTG CAAAACCTGC CGCGAGCACC GGCACAAAAC AAACGATCGA GTTCAAGCTT CCGGAACTAG GCGAGAACAT AAAGCAAGGC CAGCTCGTCC GCATCATCGC TAAGCAAGGT GCGAGTGTCA GCGACGGCCA ACCGATCCTC GAACTTGAAA CCGACAAAGC TGTCATCGAA GTTCCCGCCA CATTGACCGG CACCATCAAA GAAGTGCATG TGAAGGAAGG CGACAAGATC GGCGTTGGCC AAACGATCTT CACCGTCGAA ACCACCGAGG GTAACACCCA GCCGCCACAT CCACACACCA ACACCGAGGG CAACACGCAA CCGCCCACCG GCGGCGGCGC TTCCTCGAAC ACGGAAGGCA ATACTCAGCC CCCGCATCCG CACTCCAACA CCGAAGGCAA TCCACAGCCG CCCACTGGCG GCGGTGGATC TTCTTCCGCG ACCGCTGCTC GCGACTTCGA ACTCAGCGGA CAGCAACTTG CTCGCCTTCA GTTCGAACTC GCTCTGCGCA GCGAAGGCAA AACCGAACGC GAGGCGCATC CGCCCGACGT TCGTGATCTT GGCGTGCGGG TCTCTCTCAC GCCACTGACG CCGGGCCGTC CCACTGTCGC CGCGTCGCCC ACGGTACGCC GTCTCGCTCG CGAAATCGGC GTCGACATCG TGCAGGTGAA GGGAACCGGT CCCGGCGGAC GCATCAGCGA AGGGGATGTA AAGCTCTTCG CAAAGCAACT GATCGTGCGC CTCCAGCACG AAGCCGCTAC CGCGAAGGCC GCTCCCAAGG TCGTGCTCCC CGACTTCAGC AAGTGGGGCT CGATCGAGAA AGAGCAGATG CGCAGCATTC GGCGCAAAAC TGCTGAGCGT CTCACGCAGG CCTGGACCAC CATCCCGCAC GTTACTCAGC ACGACCGCGC TGATATCACC GAGCTCGAAA AGCTGCGCGA GAAGTTCGCG AAGCAAGCCG AAGCCGCGGG TGGCAAGCTC ACAGTCACGG CCATCGCGCT CAAAGTCATT GCTGCCGCGA TGAAGAAGTT CCCCAAGTTC AACGCGTCCA TCGATATCGA TCGCGAAGAA ATTATCTATA AGAAGTACGT GCACATCGGC GTCGCCGTTG ACACTGAAGC CGGACTCCTC GTTCCCGTAC TTCGCAACGT GGACCAGAAA AACGTCTATC AGATCGCGGC CGAGATGAAC GAACTCTCGA AGCGCGCGCG CGAACGCAAG CTCAAGCCGG AAGAGATGGA AGGTGGCACC TTCACCATCA CCAACCTCGG TGGCATTGGC GGCACATCAT TCACGCCGAT CGTGAACCTC CCCGAGGTTG CCATCCTGGG CCTCTCGCGC GGACGCACTG AGCCCGTGTG GGTCAACGAT CACTTCGAGC CCCGGACGAT GCTCCCGCTC TCGCTCAGCT ACGACCACCG CATCATTGAT GGTGCCGACG CCGCCCGCTA CCTTCGCTGG GTCGCTGACG CGCTCGAACA ACCGGTGCTG CTGCTCCTGC AAGGTTGA
|
Protein sequence | MAQEFKLPEL GENIASGDLV RVMVKPGDTV KEGQPVIELE TDKAVIEVPS TVSGKVQEVK VQKGQKLKVG AIIFTYGDGA AAAPVQPAAP AKTEDKPKAE PKAEAPKQAA PSAAKPAAST GTKQTIEFKL PELGENIKQG QLVRIIAKQG ASVSDGQPIL ELETDKAVIE VPATLTGTIK EVHVKEGDKI GVGQTIFTVE TTEGNTQPPH PHTNTEGNTQ PPTGGGASSN TEGNTQPPHP HSNTEGNPQP PTGGGGSSSA TAARDFELSG QQLARLQFEL ALRSEGKTER EAHPPDVRDL GVRVSLTPLT PGRPTVAASP TVRRLAREIG VDIVQVKGTG PGGRISEGDV KLFAKQLIVR LQHEAATAKA APKVVLPDFS KWGSIEKEQM RSIRRKTAER LTQAWTTIPH VTQHDRADIT ELEKLREKFA KQAEAAGGKL TVTAIALKVI AAAMKKFPKF NASIDIDREE IIYKKYVHIG VAVDTEAGLL VPVLRNVDQK NVYQIAAEMN ELSKRARERK LKPEEMEGGT FTITNLGGIG GTSFTPIVNL PEVAILGLSR GRTEPVWVND HFEPRTMLPL SLSYDHRIID GADAARYLRW VADALEQPVL LLLQG
|
| |