| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2620 |
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| Symbol | |
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| ID | 4072029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3090783 |
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| End bp | 3092189 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637984637 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_591695 |
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| Protein GI | 94969647 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.882414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCC CTCATATTCA TCTCATCGGC GTATGCGGTA CCGCGATGGC GTCGCTCGCT
GGCATGTTGA AAGAACGCGG GATTCGCGTT TCAGGTTCCG ACGCCGCTGC TTATCCTCCG
ATGTCGGACT TCCTGGCGAA GATCGGCGTG TCCGTCGCAC AGCCGTTTGC GGAAGCAAAC
CTCGATCCGC GGCCTGACCT CGTCGTTGTT GGCAATGCGA TTTCACGCGG CAATGTCGAG
CTGGAGTACG TGCTCGATCG CCGCATTCCA TTTACTTCGA TGGCGGAGCT GCTGCACCGC
GAATTTCTCC ACGACCGCGA AGTCATCGCC ATTGCCGGTA CGCATGGAAA AACGACAACG
ACCTCAATGC TGTCGTGGAT CTTTCATCAT GCGGGTCGCA ACCCATCGTT TTTGATTGGT
GGAATCGCCG AGAACTTCGG CTCCAGCTTC GCCGTCGCCG ATGGCGCGGA GTTCATTATC
GAAGGCGATG AGTACGACAC CGCGTTCTTC GACAAGGGAC CGAAGTTCCT CCACTACTTT
CCAAAGTCGC TCATCCTTAC CGCTGTCGAG TTCGATCACG CTGACATCTA CAAGGACCTC
GATGAAGTGA AGACCGCGTT CAAGCGGCTT GTCAATCTGG TGCCACGAAG CGGCTGCATC
CTCGCGTGGG ACGGGCACCC GAATGTGGAC GAGTGCGTGA CGAAAGCGTT CTGCAAAGTC
GAGCGCTACG GTTTCACCGC GCGCGCAGAC TGGCGAATTG TGGACGTGGA GCACGCGCCC
GAGAAGACAT CGTGGCGAGT CCTGCGCAAC GGAGAACCTT GGGCGCATTT CGAATTTCCC
ATCGCAGGCG ATTACAACGT GTTGAACGCC ACCGCTGCGG CCGCGATGGC CGCTCACTAC
GCGATTGACA CGGATGCCAT CGCCGAAGCC CTCCACCACT TCAAGAGCGT GAAGCGCCGC
CTGGAGGTCA AGGCCGAAGT GAAAGGCATC ACCATCATTG ACGATTTCGC GCACCATCCC
ACCGCCATCG CCGAGACGCT GAAAGCGTTG CGCAGCCGCT ACGCGGGACG ACGCCTTTGG
GCGGTGCTCG AGCCGCGATC GAACACGCTT CGCCGCAATG TTTTTCAGCA CGAGTTGGTG
CAAAGTTTGC GCATTGCTGA TCGCGTGGTG CTGGCGGCCA CCTTCAAATC GGAAGCGATC
CCGGAGAAAG AGCGTTTGGA TCCTGCGAAT GTTGTCGCGG AGTTGAACCA ATTGGGAACT
CCTGCCGAAC TGCACGCGAG CGCGGACAAA ATTGTGGCGG CAATCGCGCC CCAGCTTGCC
GCGGGCGATG TCGTTGGCAT TCTCTCGAAC GGGGGCTTCG GCGGAATCTA CGAGAAGCTT
CCAGCACGGA TCGAGGCTGG CGCGTGA
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| Protein sequence | MNGPHIHLIG VCGTAMASLA GMLKERGIRV SGSDAAAYPP MSDFLAKIGV SVAQPFAEAN
LDPRPDLVVV GNAISRGNVE LEYVLDRRIP FTSMAELLHR EFLHDREVIA IAGTHGKTTT
TSMLSWIFHH AGRNPSFLIG GIAENFGSSF AVADGAEFII EGDEYDTAFF DKGPKFLHYF
PKSLILTAVE FDHADIYKDL DEVKTAFKRL VNLVPRSGCI LAWDGHPNVD ECVTKAFCKV
ERYGFTARAD WRIVDVEHAP EKTSWRVLRN GEPWAHFEFP IAGDYNVLNA TAAAAMAAHY
AIDTDAIAEA LHHFKSVKRR LEVKAEVKGI TIIDDFAHHP TAIAETLKAL RSRYAGRRLW
AVLEPRSNTL RRNVFQHELV QSLRIADRVV LAATFKSEAI PEKERLDPAN VVAELNQLGT
PAELHASADK IVAAIAPQLA AGDVVGILSN GGFGGIYEKL PARIEAGA
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