| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2573 |
|---|
| Symbol | |
|---|
| ID | 4070536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3036332 |
|---|
| End bp | 3037867 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637984590 |
|---|
| Product | Cna B-type protein |
|---|
| Protein accession | YP_591648 |
|---|
| Protein GI | 94969600 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGC ATCCGATTCT CCCCTTTCGA AAAGTTGTAC TTCTCGTCGT CGCAGCCCTT
CTTCTCCCTA CGCTCGTGTT CGCGCAGGCT TACTTCGGTA CAGTAAGCGG AAGCATCGTC
GATACCAGTG GGGCCGTCGT GCCCGGCGTC AATGTGACGC TGACTGACAT GCAAAAGGGC
TTCACATTCC ATGCGCAATC GGGCAGCGAT GGACACTACC TCTTCCGCTC CATTCCCCCG
GGGGTTTATC GGGTTTCAAC CGAGGCTACG GGCTTCGAGA AAGCGACCAG CACCAACGTC
AAAGTTGATA TCAACGAGAA CGCCACAGCG AACCTGACTC TCAAGGTGGG CACGACCACC
CAGACCGTGG ATGTTGCCGG GAATGCTCAG AAGATTGAGA CCGAGGACGC GGAAACCGGC
CAGGTCATCA ATCGGAAATT CATCAACGAT CTGCCCCTCA TTAGCCGCTA CGTGATGGAC
TTGACCTACT TAGCTCCCGG CGTGGCCGAC ATGGACGACC AATGCCCGAA CTGCGGTGGA
ACGAATTTCG TTTCTAACGG GAGCCGTGGT GCTTCGGCCG ACATCTTGCT AGACGGTGCC
TCCACCACGA ATTTCGAACC GAACGGTGGC GTGACGCAAG CAACGTACTC GCCGTCTCCG
GAAGCGGTAG AAGAGTTCAA GGTCGAGCAA TCGAATTTCA GCGCGGAATA CGGATTCTCA
GGAGCGAGCG TCATCAACAT GGTGACGCGC TCTGGGACCA ACAAGTTTCA CGGCAGCGTG
TACGACTATC TGCGTAACCA GGTGCTGGAC GCCAACAACT GGTTCAGCAA TTACTACGGG
GATCCCATAC CGGCGCTGAA GCGGAACAAC TATGGAGTCA CCATCGGCGG ACCGATCATT
AAGAACAGGA CCTTCTTCTT TTTCGATTAC GACGGTTTCC GCGAATCATC CGCGAGTTCG
GCAACGGCGG GTGTTCCCAC CGACGCCATG CGGGCCGGCG ATTTCGGCGA GGTATGCAGT
GAAAAGGGCG GCAGCTTTGA CTCCCACGGC ATCTGCAGCG TTACGGCCGG ACAAATCTAC
GATCCCTATC AAGGTGTGTA CGATCCCGGC AACGGTGGAA CCAACCGCAA TGTCGCCATT
CCGTACAACA ACCTGGCCAC TTACGCGAGC CCGGGAAACG CGGCGTTGAT TGGCAGTCCG
TATCAACTTC CGGTTCATCC CGGAAACCTG ATCGATCCGG TAGCGCAAAA GATGATGGGC
CTCTTCCCGA AGCCGAATAT TTCGGGTGGA TCGATTTACC AGAACTGGTA TAGCTCAGGT
GCTTCACAGG GATTCAACGA TCAACTCGAC TTCAAGATCG ACCACCGTGT CTCGGAGAAG
AACCTTCTCA GCGGTAAGTA CTCGCACCAC TGGAACCACA ACGCTGGGTT CAACTGCTTC
AAGAATTTCA TTGATCCTTG CCAGGGCGGC CCCAACGAGT CAAGCGCAAA CCTGTTCGCG
ATCATGACAC CCATACGTTC AGCCCGACAT TCCTGA
|
|---|
| Protein sequence | MALHPILPFR KVVLLVVAAL LLPTLVFAQA YFGTVSGSIV DTSGAVVPGV NVTLTDMQKG
FTFHAQSGSD GHYLFRSIPP GVYRVSTEAT GFEKATSTNV KVDINENATA NLTLKVGTTT
QTVDVAGNAQ KIETEDAETG QVINRKFIND LPLISRYVMD LTYLAPGVAD MDDQCPNCGG
TNFVSNGSRG ASADILLDGA STTNFEPNGG VTQATYSPSP EAVEEFKVEQ SNFSAEYGFS
GASVINMVTR SGTNKFHGSV YDYLRNQVLD ANNWFSNYYG DPIPALKRNN YGVTIGGPII
KNRTFFFFDY DGFRESSASS ATAGVPTDAM RAGDFGEVCS EKGGSFDSHG ICSVTAGQIY
DPYQGVYDPG NGGTNRNVAI PYNNLATYAS PGNAALIGSP YQLPVHPGNL IDPVAQKMMG
LFPKPNISGG SIYQNWYSSG ASQGFNDQLD FKIDHRVSEK NLLSGKYSHH WNHNAGFNCF
KNFIDPCQGG PNESSANLFA IMTPIRSARH S
|
|---|
| |