| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2567 |
|---|
| Symbol | |
|---|
| ID | 4070530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3030188 |
|---|
| End bp | 3031366 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637984584 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_591642 |
|---|
| Protein GI | 94969594 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGA AACGCCTGCT AGTGACGGCT GCTTTCGCGC TTTCAAGTTT CGGCATGGCG
CAGTCCGCGC CCGCGCATCC TGACACTCAA TCCCAGCAAC CCGCAGCCAC ACAAGGTGGT
GAGACGCCAG ACGCGCAGCA GGCACCCGCC GATGACAGCA CAGCCGCGCC CGCCGCGGGC
ACCGACTCCA CCGCGACCAA GGATCCTCTC GCCAAGGAGG CGACCGAAAA TCTGCCGAAA
GCGAGTGGCG TGAAACACGA TGGCTCGCGC GATGACGTCT CGGCGATTGG CAATCGTCAC
ATCGGTCAGG GAACAAGTCC GGGTGACTGG TACTCGCTGG AGAAAGAAAT TCGGATGGGC
AAAGGCTATT CCGAACAGAT CGAAGCCGGC ATGAAGCTGG TGCAGGACCC GGTTGTGACG
GAATACGTCA ACCGCATCGG CCAGAACATC GTTCGCAATT CCGACGCGCG CGTACCGTTC
ACGATCAAGG TCGTGGATTC GGACGAGATC AATGCCTTCG CGCTGCCGGG CGGCTTCTTC
TACGTGAATT CAGGGCTGAT CCTGGCGGCT GATGAAGAAG CGGAACTCGC CGGCGTGATG
GCCCACGAGA TCGCTCACGT TGCTGCGCGT CACGCGACAC GGCAGATGAC CCGGGGTCAG
ATCGCGAACT TGGCGACGAT TCCTCTGATC TTTGTCGGTG GTGGTCTCGG CTATGCGCTG
CAGTCCGCGG TCAGCCTCGC ACTGCCAATG ACCTTCCTCA AGTTCTCGCG CGGCTTTGAA
GCCGAAGCCG ATTACCTCGG CCTCCAGTAC ATGTACGCGA CGGGCTACGA TCCGCAGGCG
TTCATTTCCT TCTTCGAAAA GGTGCAGGCG AAGGAAAAGA AGAAGCCGGG TACGTTGGCG
AAGGCGTTCT CAACCCATCC GCAAACGCCG GACCGCATTG AGAAATCTCA AGAAGAGATT
GCTCGCATCC TGCCCGCCCG CGACCAGTAC ATAGATGACA CTTCGGAATT TCAGACAGTG
AAATCCCGTC TTGCCGCCCT CGAGAATCGG CATAAGGTCG AGGACCAGAA GGAAAACCGT
CCGACGCTGC GGCGCACCAC GGCTGACAAC ACTGGCAGTA CGGACAGCAA GGGCACGAAC
GACGATGATC GCCCGACGTT GAAAAAGCGC GACGACTAA
|
|---|
| Protein sequence | MKLKRLLVTA AFALSSFGMA QSAPAHPDTQ SQQPAATQGG ETPDAQQAPA DDSTAAPAAG
TDSTATKDPL AKEATENLPK ASGVKHDGSR DDVSAIGNRH IGQGTSPGDW YSLEKEIRMG
KGYSEQIEAG MKLVQDPVVT EYVNRIGQNI VRNSDARVPF TIKVVDSDEI NAFALPGGFF
YVNSGLILAA DEEAELAGVM AHEIAHVAAR HATRQMTRGQ IANLATIPLI FVGGGLGYAL
QSAVSLALPM TFLKFSRGFE AEADYLGLQY MYATGYDPQA FISFFEKVQA KEKKKPGTLA
KAFSTHPQTP DRIEKSQEEI ARILPARDQY IDDTSEFQTV KSRLAALENR HKVEDQKENR
PTLRRTTADN TGSTDSKGTN DDDRPTLKKR DD
|
|---|
| |