Gene Acid345_2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2544 
SymboltpiA 
ID4072188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3004898 
End bp3005650 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content61% 
IMG OID637984561 
Producttriosephosphate isomerase 
Protein accessionYP_591619 
Protein GI94969571 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTA AGAAGATCAT TGCCGGTAAT TGGAAGATGC ATAACACGCC GCAGCAATCG 
CTGGCGTTCG TAAAGGCGTT TCTGCCGCTG GTGGCAGACC ACACGCGCGA TGAGATCGTG
CTTTGCCCGC CCTACCTTTC ACTGGCAACC GTGGTTGAAG CAACCAAGGG ATCGAATGTC
ATGGTCGGCG CGCAGAACAT GCACTGGGAG GTAAAAGGCG CGTTCACCGG TGAGTGCTCG
CCTGAGATGC TGGTTGAGAG CGGCGTGACC CACGTGATTA TCGGCCACTC GGAACGCCGC
CAGTATTTCA ACGAGACCGA CGACACCGTC AACCGCAAGC TCGAGGTCGC CCTCGAGCAC
GGGCTCACGC CCATCGTCTG CGTCGGCGAA GTCCTCGAAG AGCGTGAAGC CGGCCTCACC
GAAGACGTCC TTCGCCGCCA GTGCTCGCGT GCCTTCCGCG GCATCTCCGG CAAGAAAGCA
GCCAAGCTCG TCATGGCGTA CGAACCGGTG TGGGCGATCG GTACCGGCAA GACCGCAACC
CCCGAAATTG CCGAAGATGC CCACCTCGTA ATTCGTGGCG AAGCAGCCAA AGCATTCGGC
GACGATTTTG CGCACGCGCT CCGTATCCAG TATGGCGGCA GCGTGAAAGC TGACAATGCG
CGTACCTTGA TGTCGCAGCC GGACATCGAC GGGGCGCTCG TCGGTGGAGC GAGCCTGGAC
GCCGCGGGCT TCGCGAAAAT CGTGAAGTAC TAA
 
Protein sequence
MSRKKIIAGN WKMHNTPQQS LAFVKAFLPL VADHTRDEIV LCPPYLSLAT VVEATKGSNV 
MVGAQNMHWE VKGAFTGECS PEMLVESGVT HVIIGHSERR QYFNETDDTV NRKLEVALEH
GLTPIVCVGE VLEEREAGLT EDVLRRQCSR AFRGISGKKA AKLVMAYEPV WAIGTGKTAT
PEIAEDAHLV IRGEAAKAFG DDFAHALRIQ YGGSVKADNA RTLMSQPDID GALVGGASLD
AAGFAKIVKY