Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2544 |
Symbol | tpiA |
ID | 4072188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3004898 |
End bp | 3005650 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637984561 |
Product | triosephosphate isomerase |
Protein accession | YP_591619 |
Protein GI | 94969571 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTA AGAAGATCAT TGCCGGTAAT TGGAAGATGC ATAACACGCC GCAGCAATCG CTGGCGTTCG TAAAGGCGTT TCTGCCGCTG GTGGCAGACC ACACGCGCGA TGAGATCGTG CTTTGCCCGC CCTACCTTTC ACTGGCAACC GTGGTTGAAG CAACCAAGGG ATCGAATGTC ATGGTCGGCG CGCAGAACAT GCACTGGGAG GTAAAAGGCG CGTTCACCGG TGAGTGCTCG CCTGAGATGC TGGTTGAGAG CGGCGTGACC CACGTGATTA TCGGCCACTC GGAACGCCGC CAGTATTTCA ACGAGACCGA CGACACCGTC AACCGCAAGC TCGAGGTCGC CCTCGAGCAC GGGCTCACGC CCATCGTCTG CGTCGGCGAA GTCCTCGAAG AGCGTGAAGC CGGCCTCACC GAAGACGTCC TTCGCCGCCA GTGCTCGCGT GCCTTCCGCG GCATCTCCGG CAAGAAAGCA GCCAAGCTCG TCATGGCGTA CGAACCGGTG TGGGCGATCG GTACCGGCAA GACCGCAACC CCCGAAATTG CCGAAGATGC CCACCTCGTA ATTCGTGGCG AAGCAGCCAA AGCATTCGGC GACGATTTTG CGCACGCGCT CCGTATCCAG TATGGCGGCA GCGTGAAAGC TGACAATGCG CGTACCTTGA TGTCGCAGCC GGACATCGAC GGGGCGCTCG TCGGTGGAGC GAGCCTGGAC GCCGCGGGCT TCGCGAAAAT CGTGAAGTAC TAA
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Protein sequence | MSRKKIIAGN WKMHNTPQQS LAFVKAFLPL VADHTRDEIV LCPPYLSLAT VVEATKGSNV MVGAQNMHWE VKGAFTGECS PEMLVESGVT HVIIGHSERR QYFNETDDTV NRKLEVALEH GLTPIVCVGE VLEEREAGLT EDVLRRQCSR AFRGISGKKA AKLVMAYEPV WAIGTGKTAT PEIAEDAHLV IRGEAAKAFG DDFAHALRIQ YGGSVKADNA RTLMSQPDID GALVGGASLD AAGFAKIVKY
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