| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2493 |
|---|
| Symbol | |
|---|
| ID | 4069862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2946176 |
|---|
| End bp | 2947078 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637984510 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_591568 |
|---|
| Protein GI | 94969520 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.667256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC GTGGCTGCGG CACGGCACTG GTTACGCCCT TTAAGCAAGA CGGCAGCGTG
GACTTCGCTG CGCAGCGCGC GCTCGTGGAG TGGCAGATCG AGTCTGGCAT TGATTTCCTC
GTGCCCTGCG GCACCACCGG CGAAACTCCC ACGCTTTCTC ATGATGAGTG GCTGAAAGTG
ATCGCACAGA CGGTTGAAGT GAACCACGGC CGCGTGCCCA TCGTTGCTGG CGCCACCTCG
AACAACACCG CGGAAGCCGT AGAAAAAGCC AAGGAAGTCG CCGCGATCAA AGGCGTGGAT
GCCATTCTTA CCGCGTCGCC CTATTACAAC AAGCCGACGC AAGAAGGCCA GTACCTGCAC
TTCAAGGCGA TTGCTGAGGC CGTGGACAAG CCGCTCGTGC TCTACAACGT TCCGGGCCGC
ACGGCGGCAA ACATTGAGAC TGCGACGTTG CTGCGACTCG CCAAGATTCC CAACATCATC
GCAGTCAAGG AAGCGAGTGG AAGCCTGCCG CAGATCATGG ACGTCTGCGC GCAAAAACCC
GAGGACTTTA CCGTGCTCTC AGGTGATGAC GCTCTCACGC TGCCGATTCT CGCGGTGGGA
GGCGTTGGCC TGGTGTCGGT GGCATCGAAC CAGATCCCGA AAGAGCTCTC GGAAATGGTG
CGGGCTGCGC TGAACAACGA CTGGGCCACC GCGCGCAAAT TACACAATCA TTTCCTTGCA
CTGATGAACG CTAATTTCCT CGAGTCGAAT CCGGGCCCGG TGAAGGCAGT GCTCGCGATG
ATGGGGCGGA TCGAGGAAAA TTATCGGCTC CCGATGGTTC CCATGCGTCC CGAGAACCGT
GCGAAGTTGG AGAAGATCGC CGCGGAAGCC GGCGTTCTGA AGAACGCAAC CGTCGCCCAA
TGA
|
|---|
| Protein sequence | MKLRGCGTAL VTPFKQDGSV DFAAQRALVE WQIESGIDFL VPCGTTGETP TLSHDEWLKV
IAQTVEVNHG RVPIVAGATS NNTAEAVEKA KEVAAIKGVD AILTASPYYN KPTQEGQYLH
FKAIAEAVDK PLVLYNVPGR TAANIETATL LRLAKIPNII AVKEASGSLP QIMDVCAQKP
EDFTVLSGDD ALTLPILAVG GVGLVSVASN QIPKELSEMV RAALNNDWAT ARKLHNHFLA
LMNANFLESN PGPVKAVLAM MGRIEENYRL PMVPMRPENR AKLEKIAAEA GVLKNATVAQ
|
|---|
| |