| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2470 |
|---|
| Symbol | |
|---|
| ID | 4072094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2921106 |
|---|
| End bp | 2922281 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637984487 |
|---|
| Product | 3-ketoacyl-CoA thiolase |
|---|
| Protein accession | YP_591545 |
|---|
| Protein GI | 94969497 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.559901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.822135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAAG TAGTGATTGT ATCGGCCGTC CGGACGCCGG TCGGCAAGGC TTACAAAGGG
ACGCTGCGGG CAACGCGGCC GGATGATCTG GGCGCGGTGG CGATCAAGGG CGCTCTGGAG
CGGGTACCGC AACTCGACGT GCGCGAGATT GAAGACGTGA TCCTGGGCTG CGCCATGCCG
GAGGCGGAAC AGGGCATGAA CGTGGCGCGC ATCGCTTCCC TGCGCGCGGG ATTGCCGGTC
GAGTGCTCGG CGATGACGAT TAATCGTTTC TGCGCGTCGG GACTGCAGGC GATTGCGCTG
GCGGCGGAGC GGATTCGCGG TGGCGGAGCG GAAGTGATCG TCGCAGGCGG TACCGAGAGC
ATGACGATGG TGCCGATGGG CGGACATAAG TTCACGGCCA ATCCGTACCT GGTGGAGACG
TATCCGGATT CGTATCTGTC GATGGGCTTG ACGGCGGAGC GGCTGGCGGT GCGCCACGGG
ATCACGCGCG AGATGGCGGA CGAGTTCTCG TACAACAGCC ACAAGAAAGC CATTGCCGCG
ATCGAGGCTG GGCGCTTCGA GGATGAGATC GTTCCGGTGC CGGTGACGTT CGTGACGCCG
AACGGATCGA AGCCGAAGAA GCAGGAGATA TTGTTCAAGG TGGACGAAGG GCCGAGGGCC
GACACGACGT TGGAAGCTCT GGCGGGATTG AAGCCGGCGT TCCACGTGAA GGGCACGGTG
ACGGCGGGCA ATTCGTCGCA GATGTCGGAC GGGGCGGCGG CTGCGGTGGT GATGTCGGCG
GAGCACGCGA AGAAATTGGG GATCAAGCCG CTCGCGAGGT TTGTGGCGTT CGCAACCGCG
GGTTACAAGC CGGAAGAGAT GGGACTGGGG CCGGTGTTCG CGATTCCGAA GGCGCTGAAG
ATCGCCGGGC TGAAGCTCGA GGACATTGAT GTGTTCGAGT TGAACGAGGC GTTCGCGGCG
CAGGCGTTGT CGGTGATCAA GGAAGCGGGG ATTGATATCA ATAAGGTCAA TCCAAATGGC
GGCGCGGTGG CGTTGGGGCA TCCGCTGGGA TGCACGGGAG CTAAGCTGAC GGCGACGATC
ATTCGTGAAT TGAAGCGGCG CAATGGGAAG TACGGGATTG TGACGATGTG CGTCGGCGGA
GGTATGGGTG CTGCGGGGAT TTTTGAAAAT CTTTAA
|
|---|
| Protein sequence | MREVVIVSAV RTPVGKAYKG TLRATRPDDL GAVAIKGALE RVPQLDVREI EDVILGCAMP
EAEQGMNVAR IASLRAGLPV ECSAMTINRF CASGLQAIAL AAERIRGGGA EVIVAGGTES
MTMVPMGGHK FTANPYLVET YPDSYLSMGL TAERLAVRHG ITREMADEFS YNSHKKAIAA
IEAGRFEDEI VPVPVTFVTP NGSKPKKQEI LFKVDEGPRA DTTLEALAGL KPAFHVKGTV
TAGNSSQMSD GAAAAVVMSA EHAKKLGIKP LARFVAFATA GYKPEEMGLG PVFAIPKALK
IAGLKLEDID VFELNEAFAA QALSVIKEAG IDINKVNPNG GAVALGHPLG CTGAKLTATI
IRELKRRNGK YGIVTMCVGG GMGAAGIFEN L
|
|---|
| |