Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2221 |
Symbol | |
ID | 4072966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2641390 |
End bp | 2642211 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637984237 |
Product | ABC multidrug efflux pump, inner membrane subunit |
Protein accession | YP_591296 |
Protein GI | 94969248 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000454003 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.343798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATCGA TTCCCGCAGT AGCACCAAGA GTTCAGATCA ATCCGGGCAC CATGATTCCG TCGTTCTCGT TATGGAAGCG CGAGGTGGTG CGCTTCTATC GCCAGCGGGC GCGCGTTATC GGTGTCATTC TGTCGCCGCT GCTCTTCTGG ATAGTGATCG GTTCGGGCTT TGGGCGTTCC TTCCGCGGCG GCGCCGGCGC CGGCGAACAC TATCTCGCGT TCTTCTTCCC CGGCGCACTA ACAATGATCG TCCTCTTTAC CTCGATCTTC ACCATGATGT CGGTAATCGA GGACCGCAAC GAGGGCTTCC TGCTCTCGGT GCTCGTCGCC CCGGTGAGCC GCTCCGTGAT CGTGCTCGGT AAAGTGCTGG GCGGGACGAC TCTTGCGGCC GTTCAAGGTC TGATCTTCCT CGTCTTCGCG CCGCTGATTG GCGTGCACTT CACGCTGACC AGCTTCCTGT TGATTGCTCT GACAGTGTTT CTGGTCGCGT TCTCGCTGAC CGCGCTCGGC TTCGCGATTG CCTGGCCGAT GGATTCGACA CAAGCCTTCC ACGCGATCAT CAACTTGTTC CTGGTGCCAC TGTGGATGCT CTCCGGTTCG ATGTTTGCCG TAAAGGACGC GTCAAAATGG CTCGGCTATT TGATGCTCAT CAATCCGCTG ACCTACGGCA CCGAGGCGAT CCGCGGCCTG ATGTATCCGG AGATGGCGGA GCCGAACTTT CCCGTCGGCA TGGATCTCGC TATCCTAGGC GGGTTTGCGC TAGTGATGTT CGCGATCGCA TTCGCGCTGG CCAATCGACG GACGACGAGA CCCTCGGCCT AA
|
Protein sequence | MASIPAVAPR VQINPGTMIP SFSLWKREVV RFYRQRARVI GVILSPLLFW IVIGSGFGRS FRGGAGAGEH YLAFFFPGAL TMIVLFTSIF TMMSVIEDRN EGFLLSVLVA PVSRSVIVLG KVLGGTTLAA VQGLIFLVFA PLIGVHFTLT SFLLIALTVF LVAFSLTALG FAIAWPMDST QAFHAIINLF LVPLWMLSGS MFAVKDASKW LGYLMLINPL TYGTEAIRGL MYPEMAEPNF PVGMDLAILG GFALVMFAIA FALANRRTTR PSA
|
| |