| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2221 |
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| Symbol | |
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| ID | 4072966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2641390 |
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| End bp | 2642211 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637984237 |
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| Product | ABC multidrug efflux pump, inner membrane subunit |
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| Protein accession | YP_591296 |
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| Protein GI | 94969248 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000454003 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.343798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGA TTCCCGCAGT AGCACCAAGA GTTCAGATCA ATCCGGGCAC CATGATTCCG
TCGTTCTCGT TATGGAAGCG CGAGGTGGTG CGCTTCTATC GCCAGCGGGC GCGCGTTATC
GGTGTCATTC TGTCGCCGCT GCTCTTCTGG ATAGTGATCG GTTCGGGCTT TGGGCGTTCC
TTCCGCGGCG GCGCCGGCGC CGGCGAACAC TATCTCGCGT TCTTCTTCCC CGGCGCACTA
ACAATGATCG TCCTCTTTAC CTCGATCTTC ACCATGATGT CGGTAATCGA GGACCGCAAC
GAGGGCTTCC TGCTCTCGGT GCTCGTCGCC CCGGTGAGCC GCTCCGTGAT CGTGCTCGGT
AAAGTGCTGG GCGGGACGAC TCTTGCGGCC GTTCAAGGTC TGATCTTCCT CGTCTTCGCG
CCGCTGATTG GCGTGCACTT CACGCTGACC AGCTTCCTGT TGATTGCTCT GACAGTGTTT
CTGGTCGCGT TCTCGCTGAC CGCGCTCGGC TTCGCGATTG CCTGGCCGAT GGATTCGACA
CAAGCCTTCC ACGCGATCAT CAACTTGTTC CTGGTGCCAC TGTGGATGCT CTCCGGTTCG
ATGTTTGCCG TAAAGGACGC GTCAAAATGG CTCGGCTATT TGATGCTCAT CAATCCGCTG
ACCTACGGCA CCGAGGCGAT CCGCGGCCTG ATGTATCCGG AGATGGCGGA GCCGAACTTT
CCCGTCGGCA TGGATCTCGC TATCCTAGGC GGGTTTGCGC TAGTGATGTT CGCGATCGCA
TTCGCGCTGG CCAATCGACG GACGACGAGA CCCTCGGCCT AA
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| Protein sequence | MASIPAVAPR VQINPGTMIP SFSLWKREVV RFYRQRARVI GVILSPLLFW IVIGSGFGRS
FRGGAGAGEH YLAFFFPGAL TMIVLFTSIF TMMSVIEDRN EGFLLSVLVA PVSRSVIVLG
KVLGGTTLAA VQGLIFLVFA PLIGVHFTLT SFLLIALTVF LVAFSLTALG FAIAWPMDST
QAFHAIINLF LVPLWMLSGS MFAVKDASKW LGYLMLINPL TYGTEAIRGL MYPEMAEPNF
PVGMDLAILG GFALVMFAIA FALANRRTTR PSA
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