Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2160 |
Symbol | |
ID | 4073102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2579320 |
End bp | 2580759 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637984176 |
Product | aromatic-L-amino-acid decarboxylase |
Protein accession | YP_591235 |
Protein GI | 94969187 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.222222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.771411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCA TGAAGAACAA CTTTCATATG CTTCCTGATG ATTTTCGCGC TGCCGGACAC AAAGTGATCG ACTGGGTGGC CGATTATCAC GCGCACGTCG AAGACTTTCG GGTGCTCTCC CAAGTGAAGC CCGGGGAGAT TTGCGATGGC TTACCGGACA GTCCGCCTCA GCAGGGGGAC TCAGTCACCA ACATCCTTCC GGACATCGAG CGCCATGTCC TGCCGGGCAT CACCCATTGG CAGTCGCCGA ACTTCTACGC CTACTTTCCC TCGAACAACT CGGGGCCATC CATCCTCGGA GATCTCGTCT CCTCCGGACT CGGAGTGCAG GGGATGTTGT GGGCGACGAG CCCTGCTTGC ACCGAAGTCG AGATGAAGAT GCTCGACTGG CTCGTTCAAA TGCTCGGCTT GCCAGAGCAC TTCCTCAATT CGTCGAAACA TGGCGGCGGG GTCATCCAGG ACAGCGCTTC AAGCGCAACG TTGTGCGCAT TGCTGGCCGC GCGCGAGCAG GCCACGAATG GCCAAACGAA CGAGGAAGGA TGCCGACTGC CGCTGGTTTG CTACACCTCA AACCAGGCAC ACTCGCACGT CGAGAAGGAC GTGAAGGTCG CCGGCCTCGG CCGCAAGAAC CTGCGTCTGA TTGATGTTGA CCAAGAATTT GCAATGCGTC CCGAAGCGCT CGAACGTCAG ATCGTCGAAG ACAAAGCGGC AGGGAAGATC CCTTTCTTTG TCTGCGCGAC CATCGGCACA ACTTCCAGCC TTGCGATCGA TCCGATCCCG GAGATTGCTG CCATCTGTAA GCGGCACGGT CTCTGGCTAC ACGTGGATGC CGCCATGGCG GGGACGGCAG CGCTTTGTCC TGAATTTCGC TGGACGCACA ACGGCGTCGA ACTGGCCGAC AGTTACGCCT TCAACCCGCA TAAGTGGATG TACACCAACT TCGACTGCAC CGCCTTCTGG GTCAAGGATC GGCACGCGTT GATCAACAGC TTGAGCGTCG TGCCGGAATA CCTGCGCAAC CAGGCGTCCG AACAAGGCGA GGTCTTTGAT TATCGCGATT GGCACGTGCC CCTGGGACGC CGCTTCCGCG CCCTGAAGCT ATGGTTCGTG ATCCGACACT ATGGCGTCGA AGGCCTGCAA CATCACGTGC GGCAGAATGT CGCATGGGCG CAGGAATTTG CCGCGTGGGT CAAGGCGGAT TCGCGTTTCG AACTGGTCGC ACCCCACCCG CTGAGTCTCG TGTGCTTCCG ACTGAAAAGC GGCGACGCCG CCAGCGAACA GCTGCTGAAG CGCGCGAATG AAAGCGGGAA GATATTCATC TCGCACACCA AGCTCGACGG CAAATATGTG CTTCGGTTCT CGATCGGGCA GGCGAAAACC GAACGGCATC ACGTCGAAGC GGCCTGGAAA TTGATTAGCG ATCTTGCAGA TCGGTCCTAG
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Protein sequence | MNRMKNNFHM LPDDFRAAGH KVIDWVADYH AHVEDFRVLS QVKPGEICDG LPDSPPQQGD SVTNILPDIE RHVLPGITHW QSPNFYAYFP SNNSGPSILG DLVSSGLGVQ GMLWATSPAC TEVEMKMLDW LVQMLGLPEH FLNSSKHGGG VIQDSASSAT LCALLAAREQ ATNGQTNEEG CRLPLVCYTS NQAHSHVEKD VKVAGLGRKN LRLIDVDQEF AMRPEALERQ IVEDKAAGKI PFFVCATIGT TSSLAIDPIP EIAAICKRHG LWLHVDAAMA GTAALCPEFR WTHNGVELAD SYAFNPHKWM YTNFDCTAFW VKDRHALINS LSVVPEYLRN QASEQGEVFD YRDWHVPLGR RFRALKLWFV IRHYGVEGLQ HHVRQNVAWA QEFAAWVKAD SRFELVAPHP LSLVCFRLKS GDAASEQLLK RANESGKIFI SHTKLDGKYV LRFSIGQAKT ERHHVEAAWK LISDLADRS
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