| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2087 |
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| Symbol | dapD |
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| ID | 4069686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2501147 |
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| End bp | 2501983 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637984102 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_591162 |
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| Protein GI | 94969114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.547747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.751736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCGT TACAGCTAGA GATCGAAAGA CTTTACGGGC TGGGCGCGCA AGCGGCGCAG
GAGCCAGGCG CCCGCGACAC GTTTTTCAAG TTGCGCGAAG CCCTCTCACG AGGAGAAGTA
CGGTCCGCTG AGAAGCGCGA CGGACGCTGG GTTGCGAACG CCTGGGTGAA GCAGGGAATT
CTGCTTGGCT TCCGGCTGGG CGAACTGGCG GCGATGGAAT CGTGTGGATC GTTCTCGTTC
ATTGATAAGG ACACGTACCC AGTACAGCAT TTCTCGCCGG AGCAGCGGGT GCGCGTGGTA
CCCGGTGGGT CAACGGTTCG CGAAGGGGCG TATCTCGCGG CATCGGTTGT CTGCATGCCG
CCGATGTATG TGAACGTAGG TGCCTACGTG GACGAAGGCA CGATGATCGA TTCGCATGCA
CTCGTCGGAT CCTGCGCGCA GATCGGTAAA CGCGTTCACC TGAGCGCAGC CGCCCAAGTC
GGTGGCGTAC TGGAACCCAT CAATGCGACG CCGGTGGTGA TCGAAGACGA TGTACTCGTT
GGCGGCAACT GCGGCGTATA CGAAGGAACC ATCGTTCACG AACGAGCAGT GCTGGGAGCC
GGGACGATCC TGACGCGATC CACGCCGCTG TTCGATATTG TGCGTGAAGA GATTTACCGA
TCGTCGGCCG AGGGTCCGCT GGAGGTTCCG GCGGGGGCGG TGGTGGTGCC GGGATCGCGG
GCGATTACGC GAGGGAAGGC GCAGGCGTGG GGACTGTCGC TCTATGCGCC GGTGATTGTG
AAGTATCGCG ATGAGAAGAC CGACAAGGGA GTGGAGTTGG AGGATTTGCT GCGGTGA
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| Protein sequence | MHSLQLEIER LYGLGAQAAQ EPGARDTFFK LREALSRGEV RSAEKRDGRW VANAWVKQGI
LLGFRLGELA AMESCGSFSF IDKDTYPVQH FSPEQRVRVV PGGSTVREGA YLAASVVCMP
PMYVNVGAYV DEGTMIDSHA LVGSCAQIGK RVHLSAAAQV GGVLEPINAT PVVIEDDVLV
GGNCGVYEGT IVHERAVLGA GTILTRSTPL FDIVREEIYR SSAEGPLEVP AGAVVVPGSR
AITRGKAQAW GLSLYAPVIV KYRDEKTDKG VELEDLLR
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