| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2039 |
|---|
| Symbol | |
|---|
| ID | 4073208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2441590 |
|---|
| End bp | 2443713 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637984053 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_591114 |
|---|
| Protein GI | 94969066 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGG GAGGAGGTAC TCACTCTTCG GCGTTGAGTG CTAGCCTAGT TCCCATCATG
GCGGGACCTC TTCGCATTGC TGTGGACACG GGTGGGACAT TTACCGATTG CGTTTGGGTG
GAGCGCGGGC GGCTGCGGAT GTTGAAGGTG TTTTCGACGC CGCATGATCC TTCGGAGGCG
ATTGCGTCCG CGGTGGCGCA GATTGTGGCG CGGGTGGGCG CGGGCCCGGA TGTGTTGCTG
CTGCATGGGA CTACCGTGGG GACCAATGCG CTGCTGGAGC GGAAGGGCGC GCGGGTGGCG
TTTGTTACGA CCAGCGGGTT TGAGGACACG CTGGAGATTG GGCGGCAGAA TCGTCCGCGG
CTGTATGAGT TGTTTGTGAA GAAGACGGCG CCGCTGGTGC CGGAGGGGCT GCGCTTTGGC
GTGCCGGAGC GGGTGGCTCC GGATGGGACA GTGCTGCGCG CGCCTTCGGA TGACGATCTG
CAGAAGCTGC GGATTTTGAT CAGCGAGACG AAGCCGGAGG CGATTGCGCT GTCGCTGCTG
TTCTCGTTTG CGAATCCTGT ACATGAGAAG AAAGTTGTAG AGGAGCTGGC GTCGCTGGAG
ATACCGGTGT CGGCTTCGCA CGTGGTGCTG CCGGAATTTC GCGAGTATGA GCGGGCTAGT
ACCGTGGTGG TGAATGCTTA TTTGCAGCCG CTGATGAGCG GGTATTTGGA GAGGCTGGCG
TGGAAGCTTG ACGGTAGTGG AGATGATAGG GGTCCTTCGA CTGCGCGTGC TTCGCACGCT
TCGCTCAGGA TGACAGAAGC AAACACTGCT TCCCGCGGAA GGGTGTTTGT GATGCAGTCT
AGCGGGGGGA TTGCGGCACT GGAAGTCGCG CGGCGGGAGC CGGTGCGGAC GGTTTTGAGT
GGGCCTGCCG GAGGTGTAGT GGGATGCGCG GCGATGGCGC GAGAGAGCGG GTTCACGCGG
GTGATTGGGT TCGATATGGG TGGGACGTCG ACCGATGTGT GCCTGGTGGA CGGCGAGATT
CGCACCAGCA CTGAGGCGGA GGTGGCGGGG CTGCCGGTGC GGGTGCCGAT GCTGGATATC
CATACGGTGG GTGCGGGCGG CGGGTCGATT GCGCGGTTTG ATGAAGGCGG GGCGCTGCGG
GTGGGGCCGG AGTCGGCGGG CGCGGAGCCG GGACCGATCT GTTATGGGCG CGGAGTGGAG
CCGACCGTCA CGGATGCGAA TTTGCTTTTG GGTCGATTGC GAAGCGATCG GTTTTTGGGT
GGAGAGTTTG CGCTCGACGT GGAGCGGACT CGGAAGATCG TGAGCGAGTG GCTGCGGAAG
CGTGCGGTGC GGATGACCAT GGAGGCATTT GCCGAGGGCG TGGTGCGGGT AGTGAATGCC
AACATGGAGC GCGCGCTCAG GGTGGTGTCG GTGGAGCGGG GATTTGATCC GCGGGAGTTT
GCGCTGGTCG CGTTTGGCGG GGCGGGGGCG CTGCATGCGT GCGAGCTGGC GGAAGCGCTG
AGTATTCCTA CGGTGGTGGT GCCGGCGCTG CCGGGGGCGT TGTCAGCACT GGGGATCTTG
GTGAGCGATG TGGTGAAGGA TTTTTCGCGG ACTGTGGTGT GGTCGGTGGG TAAGGTCGTG
CCGCGAGAGA AGTTGGAGCG GGAGTTTCGC ACGATGGAGT CGCGGGCGAA GGCGGAGTTT
GCGGCGGAGG GGTGGAAGGG GAAGCCGACA ATTCGGCGGT CGGTGGATGT ACGGTATCGA
GGGCAGGGGT TCGAGTTGAA CATCGCGTAT GGAGCGGGGT TTGTGGCGGC GTTTCATGCG
GAACATGAGA AGCGATATGG GTATGGGCAT CCGGAGCGGG AGATTGAGAT GGTTACGCTG
CGGGTGCGGG CGGGGATTGC GGCGCCGAAG GTGAAGCTTG CGATTTCTCC TTCACTGGAG
AGAGGCGCAT CTTCGAAAGA GAAGGTGGTG TTAGGCGGGA AGGCGATGAC GACGGCGGTG
GTGGATCGCG AGGCGATAGG TTCGGGATTT AAGGGGCCGG CGATTATTAC CGAGTACAGC
GCTACGACCG TGGTGCCGCC GGGTTGGAGG GGGAAGAAGG ATGCGGTGGG GAATCTGGTA
CTCCAAAGAG CGCGCAGGGG CTGA
|
|---|
| Protein sequence | MALGGGTHSS ALSASLVPIM AGPLRIAVDT GGTFTDCVWV ERGRLRMLKV FSTPHDPSEA
IASAVAQIVA RVGAGPDVLL LHGTTVGTNA LLERKGARVA FVTTSGFEDT LEIGRQNRPR
LYELFVKKTA PLVPEGLRFG VPERVAPDGT VLRAPSDDDL QKLRILISET KPEAIALSLL
FSFANPVHEK KVVEELASLE IPVSASHVVL PEFREYERAS TVVVNAYLQP LMSGYLERLA
WKLDGSGDDR GPSTARASHA SLRMTEANTA SRGRVFVMQS SGGIAALEVA RREPVRTVLS
GPAGGVVGCA AMARESGFTR VIGFDMGGTS TDVCLVDGEI RTSTEAEVAG LPVRVPMLDI
HTVGAGGGSI ARFDEGGALR VGPESAGAEP GPICYGRGVE PTVTDANLLL GRLRSDRFLG
GEFALDVERT RKIVSEWLRK RAVRMTMEAF AEGVVRVVNA NMERALRVVS VERGFDPREF
ALVAFGGAGA LHACELAEAL SIPTVVVPAL PGALSALGIL VSDVVKDFSR TVVWSVGKVV
PREKLEREFR TMESRAKAEF AAEGWKGKPT IRRSVDVRYR GQGFELNIAY GAGFVAAFHA
EHEKRYGYGH PEREIEMVTL RVRAGIAAPK VKLAISPSLE RGASSKEKVV LGGKAMTTAV
VDREAIGSGF KGPAIITEYS ATTVVPPGWR GKKDAVGNLV LQRARRG
|
|---|
| |