Gene Acid345_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2017 
Symbol 
ID4070347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2416363 
End bp2417364 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content57% 
IMG OID637984031 
Product3-oxoacyl-[acyl-carrier-protein] synthase III 
Protein accessionYP_591092 
Protein GI94969044 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTTCTG TACGTCGCGC CAAGATTACG GCGCTTGGAA CCTACGTTCC ACCCCGCGTC 
CTCTCAAACT TTGACCTTGA AAAGATGGTG GATACCACCA ACCAGTGGAT CCTCGAACGG
ACCGGCATTC GCGAACGTCA TCTCGTGGAT AAGGGCGTTG CTGCCAGCGA CTTAGCCGTC
GAGGCCGCGA AGAAGTGTCT GGCCAACCGC GGCATAGAGG CCGCGGAAGT CGAATGCATC
GTTGTCGGCA CCGTGACCCC GGACATGATG TACCCCTCCA CCGCTTGCCT GGTGCAGCAC
AAACTCGGCA TTCCCAATGC CTGGGGCTTC GACGTATCCG CCGGATGCTC GGGATTTCTT
TTCTCGCTGA CCACCGGAGC CAAGTTCATT GAGAGCGGCC AGTACAAGAA GGTCCTTGTG
ATCGGCTCCG ACGTGAACTC CTCGATGATC GACTACACCG ACCGCGCCAC CTGCATCATC
TTCGGCGACG GCGCCGGAGC GGTCCTGCTG GAACCGACGG AAGACGGCGA AGACGTCGGC
GTCATGGACC ACATTCATCA GGTCGAAGGT GTCGGTGGAC AGTACCTCTA CATGCCCGGC
GGCGGCAGTT TGAACCCGGC ATCGCACGAA ACGATTGACC AGAAAATGCA TTATGTTCAT
CAAGATGGAC AAAATGTCTT CAAGTATGCC GTGAAGAAAA TGTCGGAGAT GACCGAGAAG
GTCCTAAAGC GCAACAGCTT GACCGGCACC GATGTGGACT GCTTCATCGC CCATCAGGCC
AACAAGCGAA TCATTGTCGC CACCGCTGAG CGCCTGAAAA TGCCCATGGA GAAGGTCATC
ATCAACATCG AGAAGTACGG CAACACTACG GCTGGAACCA TTCCTTTGGC CATGCAGACG
GCACTCGATG AAGGCAAACT GAAGAAGGGC AGCAACGTTC TACTTGCCGC CGTCGGTGCG
GGATTCACCA GCGGCGCCAC GCTCCTGCGC TGGGCGTTCT AA
 
Protein sequence
MTSVRRAKIT ALGTYVPPRV LSNFDLEKMV DTTNQWILER TGIRERHLVD KGVAASDLAV 
EAAKKCLANR GIEAAEVECI VVGTVTPDMM YPSTACLVQH KLGIPNAWGF DVSAGCSGFL
FSLTTGAKFI ESGQYKKVLV IGSDVNSSMI DYTDRATCII FGDGAGAVLL EPTEDGEDVG
VMDHIHQVEG VGGQYLYMPG GGSLNPASHE TIDQKMHYVH QDGQNVFKYA VKKMSEMTEK
VLKRNSLTGT DVDCFIAHQA NKRIIVATAE RLKMPMEKVI INIEKYGNTT AGTIPLAMQT
ALDEGKLKKG SNVLLAAVGA GFTSGATLLR WAF