| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1988 |
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| Symbol | |
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| ID | 4069375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2381467 |
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| End bp | 2382984 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637984002 |
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| Product | ABC peptide transporter, periplasmic ligand binding protein |
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| Protein accession | YP_591063 |
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| Protein GI | 94969015 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.693495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.584075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGC TGCTCTTCGC GCTGGTTGCT ATGCTGCTGT TTTCTCTTTC CTGTGCGCTC
AGCAAGCCCG ACCCCAACAC GCTAGTGATG ATCATCGAGA GCAGCCCAAC GAATCTCGAT
CCCCGCATCG GCCTCGACGC GCAATCCGAA CGCGTCGACG AACTTCTTTT CGACGCCCTC
GTCCGTCGCG ACGAACACTT CAACCTCCAA CCCTCTCTCG CCGAACGATG GGAAATCCCA
GACCCGCTGA CGTACATCTT TCATCTGCGA CACGATGTCC GCTTCCACAA CGGTCAATTG
CTCACTTCAC GGGATGTGAA GTGGACTCTC GACTCTCTCA TTTCCGGCAA GCTCATCAGC
CCCAAGGCCA GCACGTACAA CAGCATCTCG TCCGTCGAAG CGCCTGATGA CTGGACCGTC
ATCCTTCATC TCAAGCAAGC ATATTCGTCC TTGCTTTGGA ACCTGAGCGA CGGCGCCTTC
GGGGTCGTCC CCAACGGCAG CACCGGCAGC TTCTCGCAAC AGCCGATTGG TTCTGGTCCG
TTCAAGTTCG TCTCAGCGCG CCAGGACCGC GATCTGGTGA TCGAGCGCAA CGATCAGTAC
TGGGGCGAGA AACCTCACCT GCAGCGCGTG CGCTTCATCG TGGTGCCCGA CGAAACCACG
CAGGCCCTCG AACTCCGTAA AGGCAGCGCC GATGCTGTGA TCAACGCTCT GAAAGCCGAC
ACCGTTCGCG TGCTCCAGAA CGAAAAGAGC ATCCAGATCG ACGTCTCACC GGGCAGCAAC
TACGCCTACC TCGCCTTCAA CATGCGCGAC CCGATCCTCA AAGACGTGCG CGTGCGGCAG
GCAATCGCAT ATGCCATTGA TCGCCAGGAG ATCATCCACT ATCTGATGAA CGACATGGCG
AAGCCTGCGA ACAGCGTGCT TCCGCCGCAA AGCTGGGCCA GCAATCCGGG CGCGAAGGGT
TATCCCCATG ATCCTGACGC GGCCAATCGC CTGCTGGATA GCGCTGGCTA TATGAAGAAA
AACGGCAACC GTTTTCAATT GGCGATGAAA ACATCCACCG ATGGCGCCAC TCGTGTGCTC
GCCGCCGCGT TGCAACAACA GATGCGAGCG ATCGGCATTG ATCTGCAGAT CCGCACCTTT
GAGTTCGCCA CTTTCTATTC CGACGTAACC AAGGGCGCCT ATCAGATCCA CTCGTTGCGA
TGGATCGGCG GTAATCAAGA CCCCGACATC TTCGAGAGCA TCTTCGCCAC CGATAGTTTC
GCGCCGAAGC GCCAGAACCG CACCTTCTAC TCCAATCCTC GCGTGGACGA ACTCATCAAG
ATCGGTCGCA GCACGGTGAA GCAAGAGGAT CGCAAGCGCG CCTATTTCGA ACTGCAAGAG
ATCGTGAATC GCGATGTCCC TTACGTGAAC CTCTGGTACT TCGACAACGT CCTCGTCCAT
ACAGTTCGAG TGCGCAACCT GCATGTCTCT GCGGCCGGCA ATTACGATTT TCTGCTGACG
GCCGAACTCG CAAATTAG
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| Protein sequence | MRKLLFALVA MLLFSLSCAL SKPDPNTLVM IIESSPTNLD PRIGLDAQSE RVDELLFDAL
VRRDEHFNLQ PSLAERWEIP DPLTYIFHLR HDVRFHNGQL LTSRDVKWTL DSLISGKLIS
PKASTYNSIS SVEAPDDWTV ILHLKQAYSS LLWNLSDGAF GVVPNGSTGS FSQQPIGSGP
FKFVSARQDR DLVIERNDQY WGEKPHLQRV RFIVVPDETT QALELRKGSA DAVINALKAD
TVRVLQNEKS IQIDVSPGSN YAYLAFNMRD PILKDVRVRQ AIAYAIDRQE IIHYLMNDMA
KPANSVLPPQ SWASNPGAKG YPHDPDAANR LLDSAGYMKK NGNRFQLAMK TSTDGATRVL
AAALQQQMRA IGIDLQIRTF EFATFYSDVT KGAYQIHSLR WIGGNQDPDI FESIFATDSF
APKRQNRTFY SNPRVDELIK IGRSTVKQED RKRAYFELQE IVNRDVPYVN LWYFDNVLVH
TVRVRNLHVS AAGNYDFLLT AELAN
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