Gene Acid345_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1975 
Symbol 
ID4069361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2365758 
End bp2367656 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content62% 
IMG OID637983988 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_591050 
Protein GI94969002 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.106015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.868951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACC AGGTTCTCGC CCGCAAATAT CGCCCGCAGA AATTTTCCGA GGTCATTGGC 
CAGGACCACG TCACCCGTAC CCTCAAGAAC GCTATCGAGC AGCAGCGCAT TGCGCATGGA
TACATTTTTA GCGGTCACCG CGGCATCGGC AAAACGACGA TCGCCCGCAT CCTGGCGATG
GCGCTGAATT GCCAGTCGGC GGACCATCCG GTGTCGGAGC CGTGCGGGGT TTGCGATAGC
TGCAAGGAGG TCAAGGCCGG GCAGTCGGTG GACGTAATCG AGATCGACGC CGCAACGAAC
CGCGGCATTG ACGAGATCCG TGAATTGCGC GAGGCGGCAC GCTATCGCCC GGCGCGCGAC
CGCTTCAAGA TTTACATCCT CGACGAGGCG CACCAAATTA CCGACGCGGC CTTCAATGCC
CTGCTCAAGA CGCTGGAAGA GCCGCCTGGA CACATCGTCT TCATGATGGC GACGACTGAA
CCGGAAGACA TTCCGCAGAC CATCCGGTCG CGCTGCCAGC ACTTCAGCTT TCATGCGGTG
AAGTTTGACG ACATCGTGTT GCAACTGCGC GACATCGCCG GCAAAGAAGG TATCGGCGCC
GAAGATGACG CGCTGGCGAT GCTCGCCGAA GCCGGTGACG GATCGATGCG CGACGCGCTC
AGCATCATGG ACCAGGCGAT TGCAGCGTGC GGCAACCAAC TTAAGACCGA TGATGTACGC
GGGCTGATGG GGACGGTTTC GTCGGACGTG CTGGAAGACA TCATGAACGG CGTGCACGCC
AACTCCAGCG AGAGCGTGCT GACGACCATC GATAAGTTGC TGATCGAAGG ACATAGCCCC
CTGCATTTCG CAAAGCAAGC GGTGCGCTTC CTTCGTAACG CAATGGTGGC GAAGGTCGCC
GGAAAAGACA GTGCCCTGCT CCAGATTTCG AGCGACGAAC GCGAGCGCGT TGCGCGCGTG
GCTGAACAAT TCAGCGAAGA AGATCTGGCG CGCTTCCTGC AGATCATGCT GCGCACCCAC
TCTGACCTTG GATACAAGCA AGAACAGCGG TTCCATCTCG AATTAGGTCT GCTGAAACTG
GTGCACGCAC AACGCATGCT GCCGCTGGAA GAACTGCTCA GTGGATCCGC AAGCGCAGCA
CCGTCGTCTG CACCGCGTGC CAGCGTGGCG GCGCCTGTTT CACGCCCTAG TTCGCCAGCG
CCGAGCGCGG CAACTTCGCG GCCATCGCCG TTTGAATCCA GCCGGACCGC GGCGGCGCCA
CGACCTTCAC CATTTGAGGT GGATCGAGCG CGGAAGAACG AGCCGAAGGC CGAGGCAGAC
GCGGAAATCA CCGCGAAAAC ACCAGAATTT ACGGCGCCGG CCGCACCCAC GCCGATGTCA
GCCGCGCCCG CGCGCGGATA CGAGCCGCAA AGCGCGCCTG CACCCATGGT TACGTCCAGT
GTTGGGAGCG CCGTTGCCGT GGCGGAGGTC GCGCCACCAC CGCCAGCCGC TGCGCCCGCG
GGGGAAACCA ACATTCCCGC CATCCGCGAC GCGGTTTTGA ATGAACTGGA AACCGCTGGG
CAGAACGTGC TCGTGCACAC GCTGGAAACC GGCGTGTGGG CCGCGAACGC GAACGAAATC
ACGGTGAAAG TCGCGCTTTC GCCGGCAATG ATCGACCTGA GCATGGGGCC GGAGGTCAAG
AAGCTGGTGA CCGCCGCGGT GAACAAGGCG ACCGGACGTC CGCTCAAATT TTCGATGGTG
GGCGGCGCAG ATCCAGCGAC GTTGGCCAAG CCCGCGCCAC GCACTGCCGT CGGTCCGTCG
GCGCGATCGC GCGCGATGCA GCATCCGCTG GTGAACTACA TGCAGGAAAA ATTCGGCGCC
GAAGTACGGA CGGTCATCGA CAAAAAGGAA GAGCGATAG
 
Protein sequence
MSYQVLARKY RPQKFSEVIG QDHVTRTLKN AIEQQRIAHG YIFSGHRGIG KTTIARILAM 
ALNCQSADHP VSEPCGVCDS CKEVKAGQSV DVIEIDAATN RGIDEIRELR EAARYRPARD
RFKIYILDEA HQITDAAFNA LLKTLEEPPG HIVFMMATTE PEDIPQTIRS RCQHFSFHAV
KFDDIVLQLR DIAGKEGIGA EDDALAMLAE AGDGSMRDAL SIMDQAIAAC GNQLKTDDVR
GLMGTVSSDV LEDIMNGVHA NSSESVLTTI DKLLIEGHSP LHFAKQAVRF LRNAMVAKVA
GKDSALLQIS SDERERVARV AEQFSEEDLA RFLQIMLRTH SDLGYKQEQR FHLELGLLKL
VHAQRMLPLE ELLSGSASAA PSSAPRASVA APVSRPSSPA PSAATSRPSP FESSRTAAAP
RPSPFEVDRA RKNEPKAEAD AEITAKTPEF TAPAAPTPMS AAPARGYEPQ SAPAPMVTSS
VGSAVAVAEV APPPPAAAPA GETNIPAIRD AVLNELETAG QNVLVHTLET GVWAANANEI
TVKVALSPAM IDLSMGPEVK KLVTAAVNKA TGRPLKFSMV GGADPATLAK PAPRTAVGPS
ARSRAMQHPL VNYMQEKFGA EVRTVIDKKE ER