Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1975 |
Symbol | |
ID | 4069361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2365758 |
End bp | 2367656 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637983988 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_591050 |
Protein GI | 94969002 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.106015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.868951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTACC AGGTTCTCGC CCGCAAATAT CGCCCGCAGA AATTTTCCGA GGTCATTGGC CAGGACCACG TCACCCGTAC CCTCAAGAAC GCTATCGAGC AGCAGCGCAT TGCGCATGGA TACATTTTTA GCGGTCACCG CGGCATCGGC AAAACGACGA TCGCCCGCAT CCTGGCGATG GCGCTGAATT GCCAGTCGGC GGACCATCCG GTGTCGGAGC CGTGCGGGGT TTGCGATAGC TGCAAGGAGG TCAAGGCCGG GCAGTCGGTG GACGTAATCG AGATCGACGC CGCAACGAAC CGCGGCATTG ACGAGATCCG TGAATTGCGC GAGGCGGCAC GCTATCGCCC GGCGCGCGAC CGCTTCAAGA TTTACATCCT CGACGAGGCG CACCAAATTA CCGACGCGGC CTTCAATGCC CTGCTCAAGA CGCTGGAAGA GCCGCCTGGA CACATCGTCT TCATGATGGC GACGACTGAA CCGGAAGACA TTCCGCAGAC CATCCGGTCG CGCTGCCAGC ACTTCAGCTT TCATGCGGTG AAGTTTGACG ACATCGTGTT GCAACTGCGC GACATCGCCG GCAAAGAAGG TATCGGCGCC GAAGATGACG CGCTGGCGAT GCTCGCCGAA GCCGGTGACG GATCGATGCG CGACGCGCTC AGCATCATGG ACCAGGCGAT TGCAGCGTGC GGCAACCAAC TTAAGACCGA TGATGTACGC GGGCTGATGG GGACGGTTTC GTCGGACGTG CTGGAAGACA TCATGAACGG CGTGCACGCC AACTCCAGCG AGAGCGTGCT GACGACCATC GATAAGTTGC TGATCGAAGG ACATAGCCCC CTGCATTTCG CAAAGCAAGC GGTGCGCTTC CTTCGTAACG CAATGGTGGC GAAGGTCGCC GGAAAAGACA GTGCCCTGCT CCAGATTTCG AGCGACGAAC GCGAGCGCGT TGCGCGCGTG GCTGAACAAT TCAGCGAAGA AGATCTGGCG CGCTTCCTGC AGATCATGCT GCGCACCCAC TCTGACCTTG GATACAAGCA AGAACAGCGG TTCCATCTCG AATTAGGTCT GCTGAAACTG GTGCACGCAC AACGCATGCT GCCGCTGGAA GAACTGCTCA GTGGATCCGC AAGCGCAGCA CCGTCGTCTG CACCGCGTGC CAGCGTGGCG GCGCCTGTTT CACGCCCTAG TTCGCCAGCG CCGAGCGCGG CAACTTCGCG GCCATCGCCG TTTGAATCCA GCCGGACCGC GGCGGCGCCA CGACCTTCAC CATTTGAGGT GGATCGAGCG CGGAAGAACG AGCCGAAGGC CGAGGCAGAC GCGGAAATCA CCGCGAAAAC ACCAGAATTT ACGGCGCCGG CCGCACCCAC GCCGATGTCA GCCGCGCCCG CGCGCGGATA CGAGCCGCAA AGCGCGCCTG CACCCATGGT TACGTCCAGT GTTGGGAGCG CCGTTGCCGT GGCGGAGGTC GCGCCACCAC CGCCAGCCGC TGCGCCCGCG GGGGAAACCA ACATTCCCGC CATCCGCGAC GCGGTTTTGA ATGAACTGGA AACCGCTGGG CAGAACGTGC TCGTGCACAC GCTGGAAACC GGCGTGTGGG CCGCGAACGC GAACGAAATC ACGGTGAAAG TCGCGCTTTC GCCGGCAATG ATCGACCTGA GCATGGGGCC GGAGGTCAAG AAGCTGGTGA CCGCCGCGGT GAACAAGGCG ACCGGACGTC CGCTCAAATT TTCGATGGTG GGCGGCGCAG ATCCAGCGAC GTTGGCCAAG CCCGCGCCAC GCACTGCCGT CGGTCCGTCG GCGCGATCGC GCGCGATGCA GCATCCGCTG GTGAACTACA TGCAGGAAAA ATTCGGCGCC GAAGTACGGA CGGTCATCGA CAAAAAGGAA GAGCGATAG
|
Protein sequence | MSYQVLARKY RPQKFSEVIG QDHVTRTLKN AIEQQRIAHG YIFSGHRGIG KTTIARILAM ALNCQSADHP VSEPCGVCDS CKEVKAGQSV DVIEIDAATN RGIDEIRELR EAARYRPARD RFKIYILDEA HQITDAAFNA LLKTLEEPPG HIVFMMATTE PEDIPQTIRS RCQHFSFHAV KFDDIVLQLR DIAGKEGIGA EDDALAMLAE AGDGSMRDAL SIMDQAIAAC GNQLKTDDVR GLMGTVSSDV LEDIMNGVHA NSSESVLTTI DKLLIEGHSP LHFAKQAVRF LRNAMVAKVA GKDSALLQIS SDERERVARV AEQFSEEDLA RFLQIMLRTH SDLGYKQEQR FHLELGLLKL VHAQRMLPLE ELLSGSASAA PSSAPRASVA APVSRPSSPA PSAATSRPSP FESSRTAAAP RPSPFEVDRA RKNEPKAEAD AEITAKTPEF TAPAAPTPMS AAPARGYEPQ SAPAPMVTSS VGSAVAVAEV APPPPAAAPA GETNIPAIRD AVLNELETAG QNVLVHTLET GVWAANANEI TVKVALSPAM IDLSMGPEVK KLVTAAVNKA TGRPLKFSMV GGADPATLAK PAPRTAVGPS ARSRAMQHPL VNYMQEKFGA EVRTVIDKKE ER
|
| |