| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1933 |
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| Symbol | |
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| ID | 4071044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2324728 |
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| End bp | 2327145 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637983945 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_591008 |
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| Protein GI | 94968960 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCC GTTACGCGCT ACGTCAAGCT ATTCGAAGGC CGGCTTTTTC GCTGGCCGTC
ATTCTTACCG TTGCGCTCGG AGTTGGCGGT GTAACCGCGA TCTTCACGAT CGTTCATGCG
GTATTGCTGA AGCCGCTTGC CTACAGGGAT CCGTCTCGCC TAGTGGCCCT CCGCCATGGC
GCAACCCCGA TGCGATACGA GGAGTTCGCA GCGGGTGCCA GGACTTTGGA TTCGCTCGGT
GCATATGCCG GAGGGCAGGA CGAGTTGTCG CTTACCGGTT ACGGCGAGCC GCAGGTCTTG
AAGGCGGCGC GCGTCTCGGC AAATTGGCTT GGAGTGGTTG GGGTTTCGCC AATGCTGGGA
CGAAGCTTCT TCGACTCCGA AGACCGAGAA GGCGGCCCGA ACGCTGCGAT GATCAGCGCC
GAACTCTGGC ATCGCGTCTT TCACGATGAC AGACATATCC TCGGACAAAC CATCGCGCTC
GACGGCTCGA CCTACGTTGT CATCGGAGTG CTTCCACCGC GTTTTCAATT CCCGATCGAG
AAGACCGACA TTTGGGTCAC GCATCCGGAG CAGTGGCTGC GCATTCCACG GGTGATGCAG
CGCAATAGTC CGACCCTGAA CCTTTTCGCG CGCCTCAAGC CGGGAGTGGA CCTTGCCACC
GCCGATGCGG AATTGCAGGT CCTGCAAAAG AATTACATCC AGGCACATCC CGGCATGCTC
GACGCGAAGC CCGACACCCC GGTGCACTGG GAGCAGATGA AAGACCTGCT CGTGAGCGAC
ATCGCAGGCA AGCTGTGGAT GCTCCTTGGC GCCGTGACGC TCGTGCTATT GCTGGTGTGT
TCCAACGTTG CCAGTCTGTT GCTGGTAAGA GCATCGGCTC GGTCTCACGA ATTTGCGGTG
CGTGCAGCGA TCGGCGCCAG CCGCGCGAGG ATCGTCGCGC AACTGCTTAC TGAGAGCCTG
CTGTATTCGT TTGTCGGCGG TGCCTTAGGT CTTCTGCTGG CATGGATCGG CGTGGCATTC
CTCAAGCAGC TGCCGGGAAT GGATCTGCCA CGCTCGGGCG AAATTCAGAT CGATTTCTCC
GTGCTGGGTT TTGCGCTGTT CCTCTCGCTC GTCACGGGGT TGATATTCGG CCTGATGCCG
TCGCTGAGCG CATCGCGCAC CGATCTCAAT CGTGTGCTGC GGGCCAGCGG CGAAGCCGGC
ATCGCGTCAG ACGGACGCCG TCGTTTTCTG CGCCTCAGCC TTCGCAGCGT TTTCGTGTTA
AGCCAGGTTG GAATCTCGGT CGTACTGCTG ATCGGCACCG TGCTGTTGAT CCGCAGTCTG
GCGAATGTAT ACCGCGTGGA TCCGGGATTT GAAAGCGCGC GGGTGGTGAC GATGAGTTTG
GCGCTCTCAC CGCAGCGCTA CGATACCGCG GCGAAACAAG TGTCGTTTTA CGAGGAGATC
GTACGTCGGG TGCAAGCGCT GCCAGGCGTG CAGGGAGCTG CGGTCACGCG TACGGTCCCG
ATGGCCGGTT TTGCGATGTC GCCCATCCAG GTGGCGGAAC GAGAGTTCTT GCCGCTCAAC
CAGCGGCCGC TTGCAGCGTT GCAGAGTGTG ACTCCTGGCT ATTTATCAAC CATGAGTATT
CCGCTCCTCC GCGGGCGCGA TATCGGTAAC CACGACCGGC AGGACGCGCC ACCGATTGCG
CTCATCAGCG TGGCACTGGC GAAGCAATTC TGGCCGCAGT ATCCCGCGGG GCCAGACCCC
ATCGGACAGC ATCTCGTATT GGGCACCAAG CAGGAGCGGT TCGAGATTGT CGGTATTTGC
GGCGACGTCC ACCAGGCAGG CCTGGATACG GATGTTGGAC CGGAGATGTA CACCGCTTTG
GCGCAGCAGC CGCCGGTGCC GGCGACGTTC GTCGTGCGTA CCGCCAGCGA TCCTCTCGCG
ATGACCGGCG CAATTCGCGC GCAGATCCTG CAGGTTGACC CTGATCAAGC AGTGAGTGAC
GTTGCCACCA TGGGCGCGGT GATCGACGAA TCAGAAGGGC AGTTGCGGAC CATGATGCGG
CTGCTCGCGA TATTTGCCTG CGTCGCCATG GTGATTGCCG TCGTGGGCTT GTATGGCTTT
ACGGCGTATG CGGTGGAGCA GCGGGAGCGG GAGATCGGCA TTCGACGCGC ATTGGGTGCC
AATCGAGTGG ATGTGCTCGC GCTCATCTTG CGGCAAACTC TCTTCCTGAC CGTTGCCGGT
TCGGTCGCTG GCGTCGGTGC GGCGATGTTC CTCAACCGCT TGCTGACGGA CATGCTCTTC
GAGGTGAAGG GAACCGATGT TCTGACGTAT GTGACGGCGG CGCTGCTATT CGTGACCGTG
GCGGTGGTAG CAAGTTACGG TGCAGCCAAA CGCGCAGCAA CCATCGATCC AATCATTGCG
ATTCGCTCGG CGAACTGA
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| Protein sequence | MNFRYALRQA IRRPAFSLAV ILTVALGVGG VTAIFTIVHA VLLKPLAYRD PSRLVALRHG
ATPMRYEEFA AGARTLDSLG AYAGGQDELS LTGYGEPQVL KAARVSANWL GVVGVSPMLG
RSFFDSEDRE GGPNAAMISA ELWHRVFHDD RHILGQTIAL DGSTYVVIGV LPPRFQFPIE
KTDIWVTHPE QWLRIPRVMQ RNSPTLNLFA RLKPGVDLAT ADAELQVLQK NYIQAHPGML
DAKPDTPVHW EQMKDLLVSD IAGKLWMLLG AVTLVLLLVC SNVASLLLVR ASARSHEFAV
RAAIGASRAR IVAQLLTESL LYSFVGGALG LLLAWIGVAF LKQLPGMDLP RSGEIQIDFS
VLGFALFLSL VTGLIFGLMP SLSASRTDLN RVLRASGEAG IASDGRRRFL RLSLRSVFVL
SQVGISVVLL IGTVLLIRSL ANVYRVDPGF ESARVVTMSL ALSPQRYDTA AKQVSFYEEI
VRRVQALPGV QGAAVTRTVP MAGFAMSPIQ VAEREFLPLN QRPLAALQSV TPGYLSTMSI
PLLRGRDIGN HDRQDAPPIA LISVALAKQF WPQYPAGPDP IGQHLVLGTK QERFEIVGIC
GDVHQAGLDT DVGPEMYTAL AQQPPVPATF VVRTASDPLA MTGAIRAQIL QVDPDQAVSD
VATMGAVIDE SEGQLRTMMR LLAIFACVAM VIAVVGLYGF TAYAVEQRER EIGIRRALGA
NRVDVLALIL RQTLFLTVAG SVAGVGAAMF LNRLLTDMLF EVKGTDVLTY VTAALLFVTV
AVVASYGAAK RAATIDPIIA IRSAN
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