Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1627 |
Symbol | |
ID | 4072553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1974220 |
End bp | 1975683 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637983636 |
Product | major facilitator transporter |
Protein accession | YP_590703 |
Protein GI | 94968655 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.518236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAACC CCGTTCCCCA AGCCAACGCT GAGTACAGCA TCTGGCGCGT GATCATGGCT TCCTCTCTCG GGACCATGAT TGAGTGGTAC GACTTCTATA TTTTCGGCAG CCTCGCGGCT ATTCTCGGAC CTAAATTCTA TCCGCCCGGC AACGATACCT TCGCCTACAT CGCTTACCTC GCAACCTTCG CCGTCGGCTT CCTCGTGCGC CCATTCGGCG CATTGTTCTT CGGACGTATC GGCGATCTGA TCGGTCGCAA GTACGCCTTT CTGGTGACTC TCTCGATCAT GGGCTTCTCG ACATTCGCGA TCGGACTGCT GCCTTCGTTC GCAAAAGCTG GATGGTTCGC CCCAATTGTT CTGCTCGCCA TCCGCATCCT GCAAGGGCTC GCGCTGGGCG GCGAATACGG TGGCGCGGCT GTTTATGTCG GCGAACACGT ACCCGACAAC AAGCGTGGCT TCTACACCAG TTTCATCCAG ATCACTGCTA CGCTCGGCCT CTTTGTTTCC CTCATCGTCA TTCTCGTAAC GCAGAGCTCG ATGTCGAAGG AAGCCTTTGC TGCCTGGGGC TGGCGCATTC CGTTCCTCAT TTCGATCTTC CTGGTGGTGA TGTCTCTGTA CATCCGCTTG AAGATGAAAG AGTCGCCGAT CTTTGCGCAG TTGAAAGCCG CAGGAATGAC CTCAACCCAG CCGCTCAAGG ACGCCTTCAC TCAGTGGCCA AACCTGAAGA ACGTACTGAT CTCGCTTTTT GGCGCGACAG CTGGGCAAGG GGTGATCTGG TACACAGGTC AGTTCTACGC GCTCTTCTAT CTTCAAACCA TCTTGAAAGT CAACGTTCGC ACCGCGAACA TCATCGTGGC TATCGCGCTC CTGCTTGGGA TGCCGTTCTT CACCGTTGCA GGCGCGCTCT CTGATCGATT TGGCCGCAAA AAACTGATGA TGGCCGCCTG TTTGCTCGCA GTGATCAGTT ACATTCCGAT TTACAAGGCC ATGCAGAGTG CGGCAGGCAA CGACGTGGTC ACCGTAAAGT CCGCCAGGAA TAAAGTCACT GGCGCCATCG GGCTTACGCC CCTTACTCAC GATGCTACGG GCGCTCTGGT TCCCGCAAAG GAAGCTCCCA ATCCAAATGT GCCTGCCTTA GTCGGGCTGA TCTTCGCCCA GGTGCTGCTC GTATGCATGA TTTACGGTCC GATTGCGGCG TATCTCATTG AGGCTTTCCC AGCGAAAGTC CGCTACACGT CGCTCTCACT GCCCTATCAC ATTGGCAACG GAGTCTTTGG CGGCCTATTG CCTTTGATTG GCCTTTCCAG TGTCGCGGCA ACGGGAAACA TCTATGCGGG ACTGTATTAC CCCATGATCG TCGCCGGCCT CACCTTTATC TTCGGCAGCC TGCTGCTGCG TGAAACCATG GGCCACCGCA TTTGGGACGA AACCGACGGA AAAGTGGCGA TCGCTTCCAA GTGA
|
Protein sequence | MANPVPQANA EYSIWRVIMA SSLGTMIEWY DFYIFGSLAA ILGPKFYPPG NDTFAYIAYL ATFAVGFLVR PFGALFFGRI GDLIGRKYAF LVTLSIMGFS TFAIGLLPSF AKAGWFAPIV LLAIRILQGL ALGGEYGGAA VYVGEHVPDN KRGFYTSFIQ ITATLGLFVS LIVILVTQSS MSKEAFAAWG WRIPFLISIF LVVMSLYIRL KMKESPIFAQ LKAAGMTSTQ PLKDAFTQWP NLKNVLISLF GATAGQGVIW YTGQFYALFY LQTILKVNVR TANIIVAIAL LLGMPFFTVA GALSDRFGRK KLMMAACLLA VISYIPIYKA MQSAAGNDVV TVKSARNKVT GAIGLTPLTH DATGALVPAK EAPNPNVPAL VGLIFAQVLL VCMIYGPIAA YLIEAFPAKV RYTSLSLPYH IGNGVFGGLL PLIGLSSVAA TGNIYAGLYY PMIVAGLTFI FGSLLLRETM GHRIWDETDG KVAIASK
|
| |