| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1621 |
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| Symbol | |
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| ID | 4072547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1964961 |
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| End bp | 1966184 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983630 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_590697 |
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| Protein GI | 94968649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCTG CTGACCTTTC AGCATTAAAA ATCGACGACA GCCACCGCAA CGCCAACCGT
GGCGGAGTGT TTCGCTGGTT CGCCATCATT CTCGGGGTCC TCGTCATCGG CACCGGCGCC
TTCTTCGCAT TGCAGAAGAA GCTCCCACCG GTTGAAGTCG TCTCGGCCCA CACCTCGGCC
CCCGGTCAGG CACAGGCAGC CACGCTGCTC AATGCCAGCG GATACGTAAC CCCGCGTCGT
CGCGCCACCG TCGCCGCCAA GATCACGGCT CGCGTCGAGC AAATTTACGC GGACGAAGGT
ATGCGTGTGA AGGCGGGCCA GGTGCTCGCC ATCCTTGACC AATCGGATGC GCGCGTGCGA
TTGAATTCGG CAGTCGCCGA TCGCGACAGC ACGCAAGCCC AACTCAGCGA TCTCCAGGTC
AACCTCAAAA ACGCGGAAAT CGAACTCCAC CGCAACGAAG AGCTGCAAAA GAGTGGGGTC
ACCACGCAGC AGGCCCTGGA TAACGCGCGC ACCACGGTCA ACAGCTACAA AGCCCGCATT
GTGGCGACGC AGCAATCGAT TGCCGCTGCC GAGTCGCGAA TCAAAGTCGC ACAACAGGAC
CTCGACAACT GCACCGTAGT CTCACCTTTC GATGGAATTG TGGTTTCCAA GGATGCGCAA
CGCGGCGAAA TGGTGTCGCC GATTTCCGCG GGCGGTGGCT TTACCCGCAC CGGCATCGCG
ACGGTAGTTG ACATGAACTC CAACGAGATC GAAGTGGACG TCAATGAGTC CTACATCGGC
CGCGTGAAGG AAGGCCAACC GGTCATGGCC ACGCTCGACG CGTATCCCGA CTGGCAGATT
CCTTCGCACG TGCGCACCAT CATTCCGACT GCCGACCGGC AGAAGGCAAC GGTAAAAGTG
CGCATCTCGT TCGACAAACT GGATCCGCGC ATTCTTCCGG ACATGGGCGT AAAGGTCGCT
TTCCTCGAAG ACAAGAAGGC AGACGACAAA GCCGCTTCAA AGCCGGCGAT GTTCCTGCCG
AAAGATGCCG TGCACGATGA CGGTGGATCG AGTGTTGTCT ATGTCTTTAA GGATGGGAAG
GCCGAACGTC GCGCCGTCCG TACTGGCGGA TCGCGTGGCG ACAATGAAGA GATTCTCGCG
GGACTTACCG ACGGCGAACA GGTGATCGTT CGCGGACCCG CGGATTTACA TGATGGACAA
ACCGTAGCAA TCAAACAGCA ATAG
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| Protein sequence | MSPADLSALK IDDSHRNANR GGVFRWFAII LGVLVIGTGA FFALQKKLPP VEVVSAHTSA
PGQAQAATLL NASGYVTPRR RATVAAKITA RVEQIYADEG MRVKAGQVLA ILDQSDARVR
LNSAVADRDS TQAQLSDLQV NLKNAEIELH RNEELQKSGV TTQQALDNAR TTVNSYKARI
VATQQSIAAA ESRIKVAQQD LDNCTVVSPF DGIVVSKDAQ RGEMVSPISA GGGFTRTGIA
TVVDMNSNEI EVDVNESYIG RVKEGQPVMA TLDAYPDWQI PSHVRTIIPT ADRQKATVKV
RISFDKLDPR ILPDMGVKVA FLEDKKADDK AASKPAMFLP KDAVHDDGGS SVVYVFKDGK
AERRAVRTGG SRGDNEEILA GLTDGEQVIV RGPADLHDGQ TVAIKQQ
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