| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1618 |
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| Symbol | |
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| ID | 4072544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1961892 |
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| End bp | 1963076 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637983627 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_590694 |
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| Protein GI | 94968646 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.656867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCATTC CGATCTCGTA CAACATTCGC AGTCTCGGAG TTCGCTGGTC CTCCACGCTC
GTAGCCGTCA TCGGCATCGC CGGCACGGTT GGAGTATTCG TAGCCATGCT GGCGCTGGCC
AACGGCTTCA AGTCGACGCT GGTGCATAGC GGCCTGAATG ACAACGCCAT CGTTCTGCGC
GGCGGAGCGA CCTCGGAGAT GATGAGCGGC ATGGGGCTTG ACCAGGTCAA GGTCATCGCC
GACATGCCGG GCGTGGCGCG CAAGAACGGC CGATCGAGCA TCAGCCCGGA GGTCGTCGTC
ATCGCGGCCT TCCCGCTGAA GAGCACAGGC ACTGATGCCA ACGTCCAGGT GCGCGGCGTG
TCGCCGCAGA TCTTCGACGT GCGGCCAAAC GTTCACATCG CGCAAGGTCG CACCTTCGAA
CCTGGGCGCA ATGAACTCAT CGTGGGACGC AACGTGCAGA AGACCTATGT CGCTGCGGCG
GGTGTTCCCT TTAATCTTGG CCAGACCGTT CGCTTCGGCG GTGGTGAATG GACCGTGGTT
GGCGTATTCG ACGCCGGCGG TTCAGCGTTC GACTCGGAGA TCTGGTGCGA CAGTGCCATC
CTCGACCAGG TCTACAAGCG TCCGCAGAAC AGCTTCCAAT CTCTGACCGT CCATCTCGAA
AACGAAGCGG CTTTCCAGAA GTTCAAGGAT GCGGTAACGA CCGATCCACG TCTGACGATG
CAAGTGCAGC GCGAGCGCGA GTATTACGAG AAGCAGTCGC GCGTGATGTC TACGCTGATC
ACTGTGCTCG GTGGCCTCGT CGCCGTTGTT ATGGCAGTCG GCGCGATTCT CGGCGCACTC
AACACCATGT ACTCCGCGGT GAGTGAGCGT GGTCGCGAAA TCGCGACGAT GCGTGCGCTT
GGCTTCGGTG CGGGCAGCGT GGTGCTGTCG TTCATGATCG AAGCGATATG TATCGCGATC
ATCGGTGGCG TCGTCGGATG TCTTGCCGTG CTGCCGATCA ACGGACTCAC GACAGGAACG
ATGAATTTCC AAACTTTTTC GCATTTGGCG TTTGCGTTCC AGGTCACACC CCCATTGATT
ATTGGTGGCC TGATCTTCTC CGTGTTCATG GGGATTCTGG GTGGCGTTCC GCCGGCGGTG
CGTGCGGCGC GGGCGCGGAT TGCAGTTGCC CTGCGAGAAC TCTGA
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| Protein sequence | MAIPISYNIR SLGVRWSSTL VAVIGIAGTV GVFVAMLALA NGFKSTLVHS GLNDNAIVLR
GGATSEMMSG MGLDQVKVIA DMPGVARKNG RSSISPEVVV IAAFPLKSTG TDANVQVRGV
SPQIFDVRPN VHIAQGRTFE PGRNELIVGR NVQKTYVAAA GVPFNLGQTV RFGGGEWTVV
GVFDAGGSAF DSEIWCDSAI LDQVYKRPQN SFQSLTVHLE NEAAFQKFKD AVTTDPRLTM
QVQREREYYE KQSRVMSTLI TVLGGLVAVV MAVGAILGAL NTMYSAVSER GREIATMRAL
GFGAGSVVLS FMIEAICIAI IGGVVGCLAV LPINGLTTGT MNFQTFSHLA FAFQVTPPLI
IGGLIFSVFM GILGGVPPAV RAARARIAVA LREL
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