| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1559 |
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| Symbol | clpX |
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| ID | 4068668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1907332 |
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| End bp | 1908603 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637983568 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_590635 |
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| Protein GI | 94968587 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.173836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00342669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGAACCA GGACTGGTAA CGAAGAAGTA CTTCGCTGTT CTTTCTGCCA TAAATCCCAG
GATGCCGTCG CGAAGCTAAT CTCTTCGCCG AGCGATTATC CGCGGGCTTA CATCTGCGAC
GAATGTGTCG CGGTCTGCAA TTCGATTCTC GAAGATGATC GCGCCGAAGC CAGTCCGTCG
GCCGCTCCGA ACCATCTTCC CAAGCCGCTG GAAGTCAAAA CCTTCCTCGA CGAATACGTC
ATCGGCCAGG ACCAGACCAA GAAGAAGCTC TCCGTCGCTG TTTACAACCA CTACAAGCGC
GTTTTCATGA ATCGCCAGCG TAGCGGCGAA GTCGAACTCC AGAAATCGAA CATCCTCTTA
GTCGGTCCCA CCGGAACCGG CAAAACGCTT TTGGCCCAAA CCTTGGCCAA GATGCTCGAT
GTTCCCTTCG CGATTGTGGA CGCGACAACT CTCACCGAAG CCGGCTACGT CGGCGAAGAT
GTCGAGAACA TCATCCTCAA GTTGCTCCAG GCTGCCGACG GCGATGTCGC CCGCGCCCAG
ACCGGCATCA TCTACATCGA CGAAATCGAC AAGATCGGCC GCAAAGACGA GAACCCGTCC
ATCACCCGCG ATGTCTCCGG TGAAGGCGTG CAGCAAGCGC TGCTCAAGAT TCTCGAAGGC
ACCGTCGCAA ACGTTCCGCC TCAAGGCGGT CGTAAGCACC CGCATCAGGA GTTCACACCC
GTCGATACGA CGAACATTCT CTTCATCGTC GGCGGCGCGT TCGTCGGCTT GGAGAAGATC
GTTGGCCGTC GCCTCGGCAA GCGCGCCCTC GGCTTCCGCG ACGAGGAAAA AGAAAAGAAC
TTCACCAGCG CCAACAACCG CGACTCCGAG ATGCTCCAGA GATCCGAACC GCAGGACCTC
ATCAAGTTCG GTCTCATTCC CGAATTTGTC GGACGCCTCC CCGTCATGGG AGTCCTCAAC
GACCTCGACG AAAACGCGCT TGTGGAAATC TTGACCAAGC CCAAGAACGC AATCGTGAAG
CAGTACCAGC GCCTCTTCGA ATTTGAAAAC GTAAAGCTGA AGTTCAGTGA CGAAGCCGTC
CGCGCCATCG CCCGCGAAGC CATGCAGCGA AAGGTCGGCG CCCGCGGTCT CCGCATGATC
CTCGAAGAGT TGATGCTCGA CTTGATGTAT AGCTTGCCAA GCCAAAAGCG CGTCAAGGAA
TTCGAGGTCA CTGCCGAAAT GGTCCAAAAA CGCGACGTCT CCATCAGCCT GATCGAGAAA
CAAGCCAGCT AA
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| Protein sequence | MRTRTGNEEV LRCSFCHKSQ DAVAKLISSP SDYPRAYICD ECVAVCNSIL EDDRAEASPS
AAPNHLPKPL EVKTFLDEYV IGQDQTKKKL SVAVYNHYKR VFMNRQRSGE VELQKSNILL
VGPTGTGKTL LAQTLAKMLD VPFAIVDATT LTEAGYVGED VENIILKLLQ AADGDVARAQ
TGIIYIDEID KIGRKDENPS ITRDVSGEGV QQALLKILEG TVANVPPQGG RKHPHQEFTP
VDTTNILFIV GGAFVGLEKI VGRRLGKRAL GFRDEEKEKN FTSANNRDSE MLQRSEPQDL
IKFGLIPEFV GRLPVMGVLN DLDENALVEI LTKPKNAIVK QYQRLFEFEN VKLKFSDEAV
RAIAREAMQR KVGARGLRMI LEELMLDLMY SLPSQKRVKE FEVTAEMVQK RDVSISLIEK
QAS
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