Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1538 |
Symbol | |
ID | 4072929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1878137 |
End bp | 1881835 |
Gene Length | 3699 bp |
Protein Length | 1232 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637983547 |
Product | TonB-dependent receptor |
Protein accession | YP_590614 |
Protein GI | 94968566 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000318851 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.580638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGTT TCTGGAACCG ATGTTTCGTT GCGCTGTTCA TCATTGCGGT GCTCGCCGCA TCGGCAATTG CGCAAAGCAC TGGCGGCCGT ATCCTCGGCA AGATTTCAGA TCCCAGCGGC GCAGTCATAC CCGGCGCCAC CGTGACGCTC ACCAACGAAG CGACCGGCGT GGCGAATACC ACGGAGTCCG ATAAGGACGG CAATTACGGC TTCCCGAGCG TGCCGGTGGG CGATTACGGC ATTGAATATA CGGCCACAGG TTTCAAGCAG AACGTGCTGC ACCACGTCAC GGTGATTTTG AACCAGGCGA TGACCCTGAA CCAGACGATG CAGTTAGGCC AGAAGCAGGA AGTGGTCGAC GTCAGTTCGG AAGCACCTAT CGTTGATACG ACTTCGACGC AGTTGGGTGC AGTGATGGGA TCGCGCTCGG TGGAGCAGCT TCCGCTGAAC TCTCGCGATA CCTATCAACT TCTGCAGTTG CAGCCGGGCG TAATGTCGAA CGTTGGCGGC AGCAACACGG TGGCGTACGG ATCGGATAAG CCGGGTGTGG TCTCCGTGAA CGGCGGCCGC GGCCGTTCGA ACAATTTCAA TGTGAATGGC GGCGACGCAA ACGACTTGTT CGCGAACCTT CCGACCATCC AGCCGAATCC TGACAGCATT GAAGAATTCC GCGTTATCAC TAACACTTTC GACGCTGAAT ATGGCCGCAA CTCCGGCGCC GTGATCAACG TGGTGACCAA GTCGGGCACC AATAATTGGC ATGGAAGCGC CTACGAATTC TTTCGAAATG CAGTCCTGAA TGCGCAGGGC TACTTCAATA CTTTTAAGCC CGCTTTCCAG CAGAACCAGT TTGGTGGAAC GTTGGGCGGA CCGATCGTTA AAGACCGGAC GTTCTTCTTC GTCTCGTACG AAGGGCGTCG AGTGAAACAA GGCACGCCGA CGGACCTGAG CTTCATGCCG GATTCGGCAA TGCGCAATGG TGACTTCAGC TCCCTGCTCG ACCCTGTAAA CATGCCGCAA TTCACAGGCA ATGTGAACTC CGCGGAAGAT GGAAGTTCGC TGATGGCGGA CACGCTGAAC TCTCGTTGCG GCCCGTATCT TGCGAACGGA CCGGTCGTCG GAGGAGAGGC TTGGGCCGAT GTGTTCCCAG GTGGAATGGT GCCGTCGCAG TGTCTCGATC CAACCGCCTC GGCGCTCACC AAGCTCTACG TCCCGCTGCC TAACCAGCCG GGCGGCTACT ACCAGAGCGC GCCTCCGCAA ATCATCAACG GTAATGAAGG TTCTATAAAG ATAGATCATC GCCTCACGAA CAACCAGAAC CTGAACTTCT ACTGGTACAT GGACGATTCC ACCACGCAAC AGGCGTTGTC GTTCTTCCAG GCGGCAGGCG CGAACGTGCC CGGATTTGGC GCGCAGATTC CGACGCGTGT GCAGCAATAC AACCTGTCGC ATACGTGGAC GATTAGCAAC ACGGTGGTGA ACGAAGCGCG CTTCACCTAC ATGCGTGAAG GCCAGCGAGG ATTCGAGAAG CCCGCACGGA CTGACATTGT GCAGAATTCG TGCCAGGGGC TGGTTGATCC GACAATGTGC TTCAGCGACC CGACGAATCC GAAGCTCGGA ATCACGCCGA ACCTCGGTGC GAGCGTCGAA GGTGTTCCAT TCATCTCGGT ATCCGGCGCG TTCAACATCG GCAACAATTT CGAAGGCCAA TTGCCACAGG TGGGCAATAG CTTTGCGTGG TCCGATAACT TGAGCAAGGT GTGGGGCAAT CACACGCTGA AGTTTGGTGG CGATGTTCGC CGCATGCGCT TCGACCAGAC GCTGTACTAC AACGTCAACG GCTACTACTC GTACTATTCC GATTCGACGA CCACCGGCTT ACCGTTGGCG GACTGGTTCC TCGGATTGCC GGCGAGCTAT TCGCAGGGTT CAGCGCAGCG CGAAAACGTC CGCAGCACAT CTCTGTATCT GTTCGCGCAA GACAGCTGGA AGATCAAACC GAACATCACG TTGAACTATG GATTGCGCTG GGAGTTGAAT ACACCGCTTG CTGACCAACT TGGCCACGTG CAAACGTACC GCCCCGGGCA GGTTACGGAC AAGTATCCAT GCACCTGCGG ACCCAACGCT CCGGACAACG CCTTCTTCCC TGTCGGGTTG GTATTCCCCG GAGATAAAGG TGTACCACCG GGTATGACGG ACACCTATTA CAAGGGATGG GCGCCGCGCA TCGGTATCGC ATACAGTCCG AATGCCGATA GCGGGCTGAG CAAGGCCCTG TTCGGAGGCC CCGGGAAGAC CAGTATCCGC GCAGGCTTTG GCTTGTTCTA CAACCCGATT GAGCAGCTTG TGCTTGAGCA GTTCGGCGCC GAGCCTCCGT TCGGCGGTAG CAACTACATC TACGATTCCA TGTTCAATAC GCCGTTCCAG GATACGGCGG GCAACCAGTA CCCGAACCCG TTCAACGGGA TCCTGACGCC GAAGCCAGGG ACGTCGATCG ACTGGTCTTC GTTCCGTCCG ATCCTTCTCT ACGGCGATAT GCAGCCGCAC ATCCGGACGC AGTACTCCGA GCAGTACAAC CTGAATATCC AGCGCGAGTT CGGCAAAGAC ACCGTGCTGC AACTCGGTTA CGTTGGCTCA CAGGCTCACC GCCTGCTGGT TACGCATGAC ATCAACTATG CGAATCCGCA AACGTGTCTC GACCTAAACG CCACCATGGG TGACGGGACG TGCGCGCAGT ACTTTGGCGA CAGCTCCTTC TACATCCCGG AAGGCACGGT CATCGCTCCG CAGGGCTTGA ACCTTCCCTA CAATCCGGAT GGCTCAACCT TTATTCCTGG CGGTACCGTG GTTGGGCCGA ACGGCATCAC TCTCGTTGGT CTTCGCCCCT ACTCTTCCCC CAATTGCCAT CCGATGACGG GCGTTGGTTG CCCGGCGGAC CAAGTACCAG TCTTCTCGAG CATCTTTGCG CAGGACACGG TCGGCAATTC GAACTACAAC TCGTTCCAGG CAATGCTGCA ACGGCGGTTC TCCGCTGGTC TGCAGTTCCA GCTGGCGTAC ACCTACAGCA AATCTCTCGA TGAAGGCTCG AGCTTCGAAG GTATCGTCAA TCCGGTCGAC ATTCATCGCA GCTATGCCGC TTCGCTCTTC GACGCGCGAC ATCGCTTTGT CGCCAGCTAC GATTGGGAAC TGCCGATCCG CAAGTTCGAA GGCTTCGCAG GCAAAGCGCT CAACGGCTGG GCGACCTCGG GCATCGTGAC GATCCAGAGC GGATTCCCGA TCCGCATAAC CGACCAGAAC GACAACGAGT TGTATAGCAG CTTCGATTTC GAAACCGTTG GGCAACCGAA CCAGGTCGGA AAATTCACCA CTTGGGATCC CCGGTCGCAC GGCGGCTACT ATTTCGATGG TACCGACGGC CAAATCTTCA CGGATAACGT CGCCTTGGGA ACCGTCGGTA ACGCGAGCCG TACCATCTGC TGTGGTCCCG GAATTGCCAA CTGGGACATG ACGTTCGTGA AGAACACGAA ATTCGGCGAG CGTTGGGACA CGCAGTTCCG CGCTGAGTTC TTCAATATTC TCAACCACAC CCAGTTCTAT AACCCCGATG GCAACATCAC GGATGGAAGC GACTTCGGAC GCATCAAGAG CACTCGCGAC CCGCGCCTCA TCCAGTTTGC CTTCAAGATT CTCTTTTAG
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Protein sequence | MYRFWNRCFV ALFIIAVLAA SAIAQSTGGR ILGKISDPSG AVIPGATVTL TNEATGVANT TESDKDGNYG FPSVPVGDYG IEYTATGFKQ NVLHHVTVIL NQAMTLNQTM QLGQKQEVVD VSSEAPIVDT TSTQLGAVMG SRSVEQLPLN SRDTYQLLQL QPGVMSNVGG SNTVAYGSDK PGVVSVNGGR GRSNNFNVNG GDANDLFANL PTIQPNPDSI EEFRVITNTF DAEYGRNSGA VINVVTKSGT NNWHGSAYEF FRNAVLNAQG YFNTFKPAFQ QNQFGGTLGG PIVKDRTFFF VSYEGRRVKQ GTPTDLSFMP DSAMRNGDFS SLLDPVNMPQ FTGNVNSAED GSSLMADTLN SRCGPYLANG PVVGGEAWAD VFPGGMVPSQ CLDPTASALT KLYVPLPNQP GGYYQSAPPQ IINGNEGSIK IDHRLTNNQN LNFYWYMDDS TTQQALSFFQ AAGANVPGFG AQIPTRVQQY NLSHTWTISN TVVNEARFTY MREGQRGFEK PARTDIVQNS CQGLVDPTMC FSDPTNPKLG ITPNLGASVE GVPFISVSGA FNIGNNFEGQ LPQVGNSFAW SDNLSKVWGN HTLKFGGDVR RMRFDQTLYY NVNGYYSYYS DSTTTGLPLA DWFLGLPASY SQGSAQRENV RSTSLYLFAQ DSWKIKPNIT LNYGLRWELN TPLADQLGHV QTYRPGQVTD KYPCTCGPNA PDNAFFPVGL VFPGDKGVPP GMTDTYYKGW APRIGIAYSP NADSGLSKAL FGGPGKTSIR AGFGLFYNPI EQLVLEQFGA EPPFGGSNYI YDSMFNTPFQ DTAGNQYPNP FNGILTPKPG TSIDWSSFRP ILLYGDMQPH IRTQYSEQYN LNIQREFGKD TVLQLGYVGS QAHRLLVTHD INYANPQTCL DLNATMGDGT CAQYFGDSSF YIPEGTVIAP QGLNLPYNPD GSTFIPGGTV VGPNGITLVG LRPYSSPNCH PMTGVGCPAD QVPVFSSIFA QDTVGNSNYN SFQAMLQRRF SAGLQFQLAY TYSKSLDEGS SFEGIVNPVD IHRSYAASLF DARHRFVASY DWELPIRKFE GFAGKALNGW ATSGIVTIQS GFPIRITDQN DNELYSSFDF ETVGQPNQVG KFTTWDPRSH GGYYFDGTDG QIFTDNVALG TVGNASRTIC CGPGIANWDM TFVKNTKFGE RWDTQFRAEF FNILNHTQFY NPDGNITDGS DFGRIKSTRD PRLIQFAFKI LF
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