Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1532 |
Symbol | |
ID | 4073020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1869474 |
End bp | 1870784 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983541 |
Product | aminotransferase |
Protein accession | YP_590608 |
Protein GI | 94968560 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA CGATTCGGAA ATACCAGGAA TACGTCATTA CCAGCTTCGT GAAGGCCGTG CAGCCTGTCG TTATTGAAAG CGCCAGCGGC GCGATCATTA AGGACATCAG CGGGCGCGAG TTCATCGACT GCTTTGCCGG CATTTCGGTG GTGAATGCCG GACATTGCAA TCCGAAGATC AACGCCGCTG CCAAGGCGCA GATTGATAAG CTCGTGCATT GTGGCTCGTA CATCTATCAC AGCCAACCGA CCGCGCAATT GGCGGAGAAG ATGGCGAAGA TCACGCCGGG GCGGTTGAAA AAGTCCTTCT TCGCCAACAG CGGCGCCGAA GCGATCGAGG GCGCGATGAA AGTTGCGCGC CTCTTCACCG GCAAGCACGA GATCATTTCG CTGCAGCAGT CCTTCCATGG ACGCACCTGG GGCACGCTGA GCATCACTGG CAACCAAGGC CGCAAGAAGC GTGGCGGCCC GTATGCTCCG GGCATCGCAT TCGCGCCGGC ACCGTATGCC TTCCGCTCGC CATGGCCTAA TGAGCCAGAG AAGTTCGCTT CCTACTGCGC GAAACAAGTG GAAGAAACAA TCCGATACTC AACCTCCGGC GATGTCGCGG CATTCATCGC CGAACCGGTG ATGGGTGAAG GCGGCATCAT CGTCCCGCCG CAAAACTACT TCCGCGAGGT GAAGGAAGTC CTCGATCGCC ATGGGATTTT GTTCATTGCC GACGAAGTAC AATCGGGCTT CGGCCGCACC GGTAAGATGT TTGCGATCGA ACACTACGAC GTCGAACCTG ACATCCTCGT CACCGCCAAG GGCATCGCCA ATGGATACCC GATCGCAGCG TTCACAACGC GTGATGAGAT TGCGGCTGCA TTCAAACCTG GCGACCACCT GTCGACTTTC GGTGGAAATC CGATTTGTTG CGCGGCTGCG CTCGCCAACA TCGAATTCTT CGAAGAAGAA AAGCTCTGTG ATCAGTCAAC CGAGAAGGGC CAACACGCGC TCACCCGCTT AAGAGCGCTG CAGGGGCGGC AGTCGGGCAT TGGCGAGGTT CGCGGGCTCG GCCTCATGAT CGGCGTGGAA CTGGTGAAAG ACGACCATCT CACACCTGCG GCCGCCGAAG CGGAAGCCGT GCGCGACACC TGCTTCAAAG CCGGTGTGCT GATCGGAGTC GGCGGCACGA ATGCCAACGT TCTCCGGCTT CAGCCGCCGC TCGTCATTAC CTACGAACAG CTCAACACCG CACTCGATGT GTTGGAGGGC GCGATCACCG AAGTAGTGGG CCGCACCGCG GCCGTTGCGG GCAAGGCATA G
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Protein sequence | MSDTIRKYQE YVITSFVKAV QPVVIESASG AIIKDISGRE FIDCFAGISV VNAGHCNPKI NAAAKAQIDK LVHCGSYIYH SQPTAQLAEK MAKITPGRLK KSFFANSGAE AIEGAMKVAR LFTGKHEIIS LQQSFHGRTW GTLSITGNQG RKKRGGPYAP GIAFAPAPYA FRSPWPNEPE KFASYCAKQV EETIRYSTSG DVAAFIAEPV MGEGGIIVPP QNYFREVKEV LDRHGILFIA DEVQSGFGRT GKMFAIEHYD VEPDILVTAK GIANGYPIAA FTTRDEIAAA FKPGDHLSTF GGNPICCAAA LANIEFFEEE KLCDQSTEKG QHALTRLRAL QGRQSGIGEV RGLGLMIGVE LVKDDHLTPA AAEAEAVRDT CFKAGVLIGV GGTNANVLRL QPPLVITYEQ LNTALDVLEG AITEVVGRTA AVAGKA
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