Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1384 |
Symbol | sdhA |
ID | 4068919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1675471 |
End bp | 1677297 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637983393 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_590460 |
Protein GI | 94968412 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0637899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGGATC CTCTAGTGAG CGAGTACATC ACGCATGAGC ACGATGTCCT GATCATCGGA GCCGGGGGCG CCGGTCTGCG CGCCGCCGTT GAAGTATCAG CCGCGGGCGC AAAGGTCGCG GTCATTTCGA AATCGCTTCT CGGCAAGGCC CACACCGTCA TGGCCGAAGG CGGCGTCGCT GCTGCGATGG GCAACGTAGA CGACCGCGAC AGTTGGCGCG TTCACTTTGC CGACACCATG CGCGGCGGCC AATATCTGAA CAATTGGCGC ATGGCAGAAC TGCACGCCAG GGAAGCTCCC GAGCGCGTGC GGGAACTAGA AGCCTGGGGC GCGCTCTTCG ATCGCACCAG CGACGGTCGC ATCCTCCAGC GAAACTTCGG AGGCCATCGC TATCCTCGGC TCGCCCATGT CGGCGACCGC ACCGGCCTCG AGATGATCCG CACGCTTCAG GACCACGGAA TCCACCTCGG GCTTGACGTC TTCATGGAGC ACACCGTCGT CACGCTCCTG AAGGACGGCG CACGCATTGC CGGGGCGTTT GGATACGATC GCGAGCGCGG CCGCTTCCAC CTGTTTCGCG CTAAGGCCGT AGTGCTGGCG ACGGGAGGAA TCGGGCGCGC CTTCAAGATC ACCAGCAATA GTTGGGAATA TACGGGCGAC GGACATTCGC TCGCCTACCA TGCCGGTGCA TCGCTCATGG ACATGGAATT CGTCCAATTC CATCCCACGG GAATGATCTG GCCGCCCAGC GTGCGCGGGA TTCTCGTCAC GGAAGGAGTT CGCGGCGAGG GCGGAGTGCT GCGCAATCGC GACGGCGAAC GGTTCATGTT CAAAGACATC CCGCCGCTCT ACGCCGCTCA AACCGCCGAC ACCCCAGAAG AAGGCTGGCG CTACACGCAA GGCGACAAGA ATGCGCGGCG TCCACCCGAG CTGCTCACCC GTGACCACGT GGCCCGCTGT ATCCGGCGTG AAGTTCGAGA GGGAAGAGGC AGCCCCCACG GTGGCGTGTT CCTCGACATC GCGTGGATCA AGGAGAAGCT CCCGCACGCG CCGGAGCATA TAAAGAAGAA GCTGCCCAGC ATGTATCACC AGTTCAAGCA GCTTGCCGAC ATCGACATTA CCCAGGAGCC CATGGAAGTC GGTCCCACCA CGCACTACAT GATGGGTGGC GTCAAGGTGG ACGCCGATTC CCAAATGTCA GACGTCCCCG GGCTGTATGC GGCGGGCGAA TGTGCGGCCG GCTTGCATGG CGCCAACCGG CTGGGCGGGA ATTCGCTCTC CGATTTATTA GTGTTCGGCA AGCGCGCCGG CGAGCACGCC GCAACCTATT CGAAGCAGAA CTCGCTGGGT GCAATCAGTC CGGAGCAACT CGCATCCACG GAAAAATGGG CGCTCGCGGC CTTCGAACGC AAAGCCTCCG AGAACCCCTA CTCCGTGCAA CATACCTTGC AGGACGTGAT GCAGGACCTG GTAGGAATCG TGCGCCATGA AGCGGAGATG CAGCAAGCTC TCGAACGCAT TCGAGAGCTG AAAGCCGCCA GCCAACGTGT CGGGGTTGAC GGTCACCGCG AATACAACGC CGGTTGGCAC ACCGCTCTCG ATTTGCAGAA CCTGTTGACC GTGTCGGAAA TGGTCGCCCG GTCCGCGCTG GAGCGTAAAG AGAGTCGCGG CGCGCACTTC CGCGATGATT TCCCCGAGAA GGAAAAGGAA TACGCTGGGT TCAACATCGT GGTGCGAATG GGCGCCGGCG GAGAAATGCA ACTCACGCGC GAGCCGATCC CGCCCATGCG CGAGGAACTG AAACAAATCA TCGAGGAGAT GAAGTAA
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Protein sequence | MEDPLVSEYI THEHDVLIIG AGGAGLRAAV EVSAAGAKVA VISKSLLGKA HTVMAEGGVA AAMGNVDDRD SWRVHFADTM RGGQYLNNWR MAELHAREAP ERVRELEAWG ALFDRTSDGR ILQRNFGGHR YPRLAHVGDR TGLEMIRTLQ DHGIHLGLDV FMEHTVVTLL KDGARIAGAF GYDRERGRFH LFRAKAVVLA TGGIGRAFKI TSNSWEYTGD GHSLAYHAGA SLMDMEFVQF HPTGMIWPPS VRGILVTEGV RGEGGVLRNR DGERFMFKDI PPLYAAQTAD TPEEGWRYTQ GDKNARRPPE LLTRDHVARC IRREVREGRG SPHGGVFLDI AWIKEKLPHA PEHIKKKLPS MYHQFKQLAD IDITQEPMEV GPTTHYMMGG VKVDADSQMS DVPGLYAAGE CAAGLHGANR LGGNSLSDLL VFGKRAGEHA ATYSKQNSLG AISPEQLAST EKWALAAFER KASENPYSVQ HTLQDVMQDL VGIVRHEAEM QQALERIREL KAASQRVGVD GHREYNAGWH TALDLQNLLT VSEMVARSAL ERKESRGAHF RDDFPEKEKE YAGFNIVVRM GAGGEMQLTR EPIPPMREEL KQIIEEMK
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