Gene Acid345_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1338 
Symbol 
ID4070627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1616987 
End bp1617907 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content56% 
IMG OID637983347 
ProductL-proline dehydrogenase 
Protein accessionYP_590414 
Protein GI94968366 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGAG CCGTCTTTAT CGGGCTATCC GAGAACAAAT CCCTGCGTCA TTTTGCCGAG 
AGCTCGGCGA TGGGCCGCCG CATGTCATCG CGCTTTGCGG CTGGACTGGA AGTAAAAGAT
GCCGTCGCGG CAGCGAAGAA GCTGAATGCG ATGGGCGCCA CCGTGAGCAT CGATAACCTC
GGCGAGAACG TGACCAACGC CGCCGAAGCA CGCGAGAGTG CAAAGCTCTA TCACGACATG
CTCGATGAGC TTTCGAAGGA CGGACTGAAG GCGAACATCA GTTTGAAGCT GACCCACATG
GGACTGGATG TGGACCCGGC GCTTTGCCAC GACCTGGTCT CCGAGCTGGT GGACCACGCG
GTGAAGATCG ACAATTTCGT CCGCATTGAT ATGGAAGGCT CACCCTACAC GCAAAAGACA
CTCGACTTCG TACATGAGCT GCATCGGATT CCTGGGCACT CGGGACATGT GGGCGCGGTG
ATCCAGTCTT ATATGCGGCG CGCAGAAGCT GACGTCGAGA AGCTGTTGTC GGAGCGGATT
CGCATACGCC TGTGCAAGGG AGCTTACAAA GAGCCGGCGG ACATCGCATT CCAGCAGAAG
TCGGAAGTGG ATGCGAACTA TGTGAAGCTC GCCAAGACAC TGATCAAGAG CGGCGTGTAT
CACGGGATCG CGACGCACGA TGAGAACATC ATCAACGAAC TGAAACAGTT CGCGAAGGCA
GAGAGCATTC CGGCTTCGGC GTTTGAGTTC CAGATGCTTT ATGGCGTGCG GCGCGGCTTG
CAGGAACAGC TGATTAAAGA AGGCTGGGGA CTGCGGGTGT ACGTACCATT CGGGACGGAG
TGGTATCCGT ACTTTATGCG GCGACTGGCG GAACGTCCGG CGAACGCGTT GTTTATCGCT
AAGAATATGT TCCGGAATTA G
 
Protein sequence
MLRAVFIGLS ENKSLRHFAE SSAMGRRMSS RFAAGLEVKD AVAAAKKLNA MGATVSIDNL 
GENVTNAAEA RESAKLYHDM LDELSKDGLK ANISLKLTHM GLDVDPALCH DLVSELVDHA
VKIDNFVRID MEGSPYTQKT LDFVHELHRI PGHSGHVGAV IQSYMRRAEA DVEKLLSERI
RIRLCKGAYK EPADIAFQQK SEVDANYVKL AKTLIKSGVY HGIATHDENI INELKQFAKA
ESIPASAFEF QMLYGVRRGL QEQLIKEGWG LRVYVPFGTE WYPYFMRRLA ERPANALFIA
KNMFRN