Gene Acid345_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1314 
Symbol 
ID4069506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1593864 
End bp1594361 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID637983323 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_590390 
Protein GI94968342 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTCG AGCCAGCCAT TACCGACGTC GAACAATTAA AAGATAAGCC CGCGCTCGCG 
AAACTGCTCG CCTCCGACTC GATCGTTGTC GAGCAGGTGA AATGGGACCG CGACGAGCTG
AGCATATGGG TGTCACGTGA AAGCCTGGTG GACGCCGTAA AGCTGTTGCG GGATTCGAGC
GAGACGCAGT TCACGTTCCT GTCGGACGTC ACCTGCACGG ATTGGTATCC GAGCGAGCCT
CGTTTTGAAG TGAGCTATCA CTTTCTTTCA ATCCCGCGGA AAGATCGCGT GCGGCTGAAG
GTGAAGCTGC TCGGCGACGA CGCCCAAGTC GATTCTCTCT TCTCTGTCTT CCCCTCGTGC
AATTTCTTTG AGCGCGAGGT CTTTGATCTC TTCGGAGTCC GGTTCCACGG GCACCCGAAC
CTCGCGCGCA TCATGATGCC CGAGGACTGG AAGGGACATC CGTTGCGCAA GGATTATCCC
GTCGAAGGTT ACCGATAA
 
Protein sequence
MPLEPAITDV EQLKDKPALA KLLASDSIVV EQVKWDRDEL SIWVSRESLV DAVKLLRDSS 
ETQFTFLSDV TCTDWYPSEP RFEVSYHFLS IPRKDRVRLK VKLLGDDAQV DSLFSVFPSC
NFFEREVFDL FGVRFHGHPN LARIMMPEDW KGHPLRKDYP VEGYR