Gene Acid345_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1313 
Symbol 
ID4069505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1592656 
End bp1593861 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content60% 
IMG OID637983322 
ProductNADH dehydrogenase I, D subunit 
Protein accessionYP_590389 
Protein GI94968341 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID[TIGR01962] NADH dehydrogenase I, D subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACA TGAATCCCAC GCCAGTTTTG GAGGCCGGTC AGGACAAGAC GATGGTCCTG 
AACATGGGCC CGCAGCACCC GTCCACCCAC GGAGTGTTGC GCCTGTTGCT GGAGATCGAT
GGCGAGACCA TCGTCCGCAT CATGCCCGAC ATCGGCTACC TGCATACCGG CATTGAAAAG
ACCTGCGAAG CGAAGTTTTA CCAGCAGGTT GTGCCGATGA CAGATCGCAT CGACTATCTC
TGCCCCATGA CCAACAACCT GGCCTATGTG CTGGCGGTGG AAAAGTTGTT GGGGCTGGAG
ATTCCCGAGC GGGCGCAGTG GATCCGCGTA CTCTGCAACG AGCTGACGCG CATCAATTCG
CACCTGGTAT GGCTGGGCAC CGGCGCCATG GACCTCGGCG CAATGACGGT TTTTCTCTAC
TGCTTCCGCG AGCGCGAAGA GCTTCTGAAG CTCTTCGAGG CTGTCGCCGG GCAGCGGATG
ATGACCTCGT ATTTCCGCGT CGGAGGAGTT TCGCTGGAGC CGCCGTTGGG CTGGTTCGAT
CGCGTGAAGA AGTTCGCCGA CACATTCCCG TCGAAGATGG ACGAGTACGA AGGCCTGCTG
ACGCAGAACC CGATCTTTGT GATGCGCACC AAGGGCGTAG CGAAAATCAC GAAAGAAGAT
GCACTCGCGC TTGGCGCCAG CGGCCCGACA TTGCGCGGCA GCGGCATTGA TTTCGATCTT
CGCCGCGACA TGCCGTACTC CGGCTACGAC AAATTCAAGT TCAACGTACC GGTAAAGACT
GAAGGCGACG TGTACGCTCG GTACCAGTGC CGCATCGCGG AACTGCGCGA GAGCTGCAAG
ATCGTGCAGC AGGCGCTCGC GGGGATGCCG GAAGGCTCGA TTAAAGCCGA CGCGCCGAAG
GTGGTGCTGC CCGACCGCGA GAAGATGAAG ACCCAGATGG AGTCGCTGAT CTATCACTTC
AAGATCGTGA CCGAGGGCTT CACCGTTCCA CCGGGCGAGG TGTATTCGGC GATTGAGTCG
CCGCGCGGCG AGATGGGTTA CTACATTGTG AGCGACGGCA CGGCCAAGCC GTACCGCGTT
CACATGCGTT CTCCATCGTT TGCGAATTTG CAGATGCTGC CATCCATGTG CACGGGCCAG
TTGCTGGCGG ACGTGGTGGC GGCAATTGGA TCGATCGACA TCGTGTTGGG CGATTGCGAT
CGGTAG
 
Protein sequence
MAHMNPTPVL EAGQDKTMVL NMGPQHPSTH GVLRLLLEID GETIVRIMPD IGYLHTGIEK 
TCEAKFYQQV VPMTDRIDYL CPMTNNLAYV LAVEKLLGLE IPERAQWIRV LCNELTRINS
HLVWLGTGAM DLGAMTVFLY CFREREELLK LFEAVAGQRM MTSYFRVGGV SLEPPLGWFD
RVKKFADTFP SKMDEYEGLL TQNPIFVMRT KGVAKITKED ALALGASGPT LRGSGIDFDL
RRDMPYSGYD KFKFNVPVKT EGDVYARYQC RIAELRESCK IVQQALAGMP EGSIKADAPK
VVLPDREKMK TQMESLIYHF KIVTEGFTVP PGEVYSAIES PRGEMGYYIV SDGTAKPYRV
HMRSPSFANL QMLPSMCTGQ LLADVVAAIG SIDIVLGDCD R