| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1285 |
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| Symbol | |
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| ID | 4071357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1560582 |
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| End bp | 1563323 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637983294 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_590361 |
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| Protein GI | 94968313 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT TTCGCGAGTT GGTGAGAGGG TGTCTGCAGG AATTGCGGCT TCCTGGTCCG
CGAGAGGCGG AGATCGTTGA GGAAGTGGCG CAGCATTTGA GCGATCGTTA CGACGGGCTG
AGGTCCATGA ACGTACCGGA GGCTGAGGCA CTGCGGACGA TTGAGGCGGA ACTCGGGGCA
CGCGACCTGG CCAACGAATT CAAACAGGTG GAACGCATGG GAACGGAGAC CGTTGCACTT
GGATCGGGCG GCGGGCGGCC GTGGACGGGG CTGAGGCAAG ACTTGCGTTA TGCGGTGCGG
GCACTGCGCG CGAGCCCGAT TTTTTCGGCA GTGTGCATTG CATCGCTGGC GCTGGGAATC
GGCGCGAATA CGGCCATCTT TCAGCTTCTG GACGCGGTAC GCATGCGGTT GCTGCCGGTG
CGGAACCCGC AGGAACTCGC GATGATACGG CCGACCAATC TGGGTCGCAC CGGGCATGGC
GCTGGTGATT TTTCGTACAT GACGAACGGC CTGTGGATGC AGGTGAAGCA ACAGCAGCAG
GGATTCAGCG ATGTATTTGC CTTTGGCGGC TGGCCGACGT TCAACCTTGC GAATGGCGGA
GAGGCGCGCT ACGCGCACGG ATTGTGGGTG AGCGGCGAAT TCTTCGATGC GCTTGGAGTG
CAGCCACTGC TCGGACGCGT GCTGCACGCG CCCGATGACC ATCCGGGATG CGGTGTGGTG
GGCGCCGTGA TCAGCTATCC GTTCTGGCAG CGCGAGTACG GCGGCGATAT GAATGTGGTC
GGGAGGACGG TGCGGCTCGA GGGGCACCCG TTCCCGATTC TCGGAGTGAC GCCTGCGTCG
TTTTATGGGA TGGAGATTGG GCGGCAGTTC GATGTAGCCG TGCCACTGTG CTCGGAGCCG
GTGATCAATG GCGAAGACAA TTTCTACAAC ATGCCGCGCG GGTGGTGGCT CACGGTGATG
GGGCGGCTGA AGCCGGGCTG GACGTTTGCC AAGGCTTCGG CACAACTGAA TGCGATCTCC
GCGAGCGCAT TCCGCGAGAC GCTGCCTCCG CAGTTTCAAG CGGACACAGC GAAGCAATAC
CTGGGGAAGA AACTCGCTGC GTACCCGGCG GCAAACGGGG TCTCCGAACT GCGCGAAAAG
TACGAAACTC CACTGTGGTT GCTGCTGGCG ATTGCTGGGT CAGTGCTGCT GATTGCCTGC
GCGAACCTTG CGAATTTGAT GCTGGCGCGA GCGAGTTCCC GGGAACGCGA GATTGCGGTG
CGAATGGCGC TTGGCGCGGA GCGAGTTCGT ATTCTGCGGC AGTTGCTGGT GGAGAGCCTG
CTGCTGGCAA GTGGCGGAGC AGTGTTCGGA CTGTTGCTGG CGTTCGGGTT GAGCCGGCTG
CTGGTGCGGT ACCTCGGACA AACCCTGTTC GTGAACCTGG CAGTGGATTG GCGGGTGCTC
GGGTTTGGCG CCGGACTGGC GATGCTAACC GCTTGCCTGT TCGGACTCGG ACCGGCGATA
CGGGCGACGA AGGCGTCCCC GGCACGGCTG ATGAACAGCT CCGGCCGTGG TCAGAGTGCG
ACCCGCGAGC GGGTGAGTTT GCGCAAGGTG CTGGTAGCGT CGCAAGTGGC GGTGTCACTG
GTGCTGGTGG CAGGGGCGTT GTTGTTCTCT GGAAGCTTGC GGCGAATCCT GGCACAGGAT
GCGGGTTTCC GGCGCGATGG CGTGTTGGTC ATGATGATGG ATTTTTCATC GCTTCAATTG
CCCACAGAGG CGCGCCTGCC CTTAAAGCGA ACATTGCTGG AGCGCGTACG CGCAGTCCCG
GGAATCGAGA GCGCAGCGGA AGTGATGTTT GGACCGTTCA TGGGCAATGG ATGGAACGAT
CGCATTGTTG TGGACGGGAA GAAACAAGAG ACAACTTCGA TCGAAGACAC AATCACCGAG
GGTTACTTCC AAACGATGCA AACGCCGCTG CTGATGGGGC GTGACTTCGA CGCTCAGGAT
ACGGCGACCT CGCAGCCGGT GGCAATCGTG AACCAGAAAT TCGCGAAGGT GCTGCTGGGA
ACAAATAACC CCATCGGGAG GACGTTCAAG GTGGAGGTTT ACGTTGGTGA GAGGCAGCCG
GAGTGGGTGG TGGTGGGGAT GGTGAAGGAC AGCAAGTTCG ACGATATGCG GGACGAGTTT
GAGCCGATGG CGTACTACCC GCAGTCACAA AATCGGTCGG ACCGGCCGGA CACGGAAGTG
GTTGTGCGCT CGCAACTGGA TCCGGCTTCG CTCATGGCGT CGTTGCGGCG CGTGTCGGCG
GACGTAAATC CTGGGATAAC GCTGGAGTTC CACGATCTAC GCCGTGAAAT CGAAAACAGC
CTTTTGCGCG AACGGCTGCT GGCCACGCTG AGCGGCTTCT TCGGAGTGCT CGCGATCTTG
CTGGCGGCGA TTGGACTGTA CGGCGTGATT GCGTACGGCG TGGCGCGGAG GACAAATGAG
ATCGGGATAC GCATGGCGCT GGGCGCAATC CGCTGGCACA TTGTGCGGAT GATCGTGAGC
GAGGCACTGG CGCTGACGGT GACTGGGGCG GTGTTCGGTG TGGCGCTGAC GGTGATCGTC
GCACGGAGCG CGGCGAGTTT GCTCTACGGC CTGACCGCGC ATGATCCGTT GATGCTCACG
GCGGCGGCGG TGGCGCTGTT GGCGGTGTGC TTGATCGCGA GCGCGATTCC GGCGATCCGC
GCGGCACGGC TGGACCCGAT GACGGCGTTG CGAGAAGAGT AA
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| Protein sequence | MPDFRELVRG CLQELRLPGP REAEIVEEVA QHLSDRYDGL RSMNVPEAEA LRTIEAELGA
RDLANEFKQV ERMGTETVAL GSGGGRPWTG LRQDLRYAVR ALRASPIFSA VCIASLALGI
GANTAIFQLL DAVRMRLLPV RNPQELAMIR PTNLGRTGHG AGDFSYMTNG LWMQVKQQQQ
GFSDVFAFGG WPTFNLANGG EARYAHGLWV SGEFFDALGV QPLLGRVLHA PDDHPGCGVV
GAVISYPFWQ REYGGDMNVV GRTVRLEGHP FPILGVTPAS FYGMEIGRQF DVAVPLCSEP
VINGEDNFYN MPRGWWLTVM GRLKPGWTFA KASAQLNAIS ASAFRETLPP QFQADTAKQY
LGKKLAAYPA ANGVSELREK YETPLWLLLA IAGSVLLIAC ANLANLMLAR ASSREREIAV
RMALGAERVR ILRQLLVESL LLASGGAVFG LLLAFGLSRL LVRYLGQTLF VNLAVDWRVL
GFGAGLAMLT ACLFGLGPAI RATKASPARL MNSSGRGQSA TRERVSLRKV LVASQVAVSL
VLVAGALLFS GSLRRILAQD AGFRRDGVLV MMMDFSSLQL PTEARLPLKR TLLERVRAVP
GIESAAEVMF GPFMGNGWND RIVVDGKKQE TTSIEDTITE GYFQTMQTPL LMGRDFDAQD
TATSQPVAIV NQKFAKVLLG TNNPIGRTFK VEVYVGERQP EWVVVGMVKD SKFDDMRDEF
EPMAYYPQSQ NRSDRPDTEV VVRSQLDPAS LMASLRRVSA DVNPGITLEF HDLRREIENS
LLRERLLATL SGFFGVLAIL LAAIGLYGVI AYGVARRTNE IGIRMALGAI RWHIVRMIVS
EALALTVTGA VFGVALTVIV ARSAASLLYG LTAHDPLMLT AAAVALLAVC LIASAIPAIR
AARLDPMTAL REE
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