Gene Acid345_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1226 
SymbolrplC 
ID4072617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1512255 
End bp1512989 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID637983235 
Product50S ribosomal protein L3 
Protein accessionYP_590302 
Protein GI94968254 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0600156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.85108e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATTAACG GATTGATTGG AAAAAAGATC GGCATGACGC AGCTCTTCGA CAGCAAAGGC 
GATGTTCGCC CTGTCACGGT GCTGCAGGCC GGTCCCTGTG TGATTACGCA GCGCAAGACG
GCAAACAAGG ACGGCTACGA TGCCGCCCAG GTCGGACTCG TTGAGTTCGT GAAGGAGACG
CGCCTGACCA AGGCCCAACT CGGCCACCTC GGGAAGAATG ATCTTCCCCC GGTGCGCACC
CTGCACGAGT TTGCGATCGT CGCGGACGGA CCCAGCGAAG CGGAGTCGAA CGGCGAAGTG
AAAGTCGGCG ACAAGGTGCT GGTCGATCTC TTCGAGGGAT CGAAGTTCGT CGATGTGACG
GGCGTGAGCA AGGGCCGCGG TTTCGCGGGC GTGGTGAAGC GCCATAAGTT CGCTGGCGGC
GCCCGGTCGC ACGGTTCGAT GTTCCAGATC TCGGGTTCGA TCGGTTCGTC GGCGTTCCCG
TCGCGCGTGT TCAAAGGCAT GCGCATGGCC GGTCACATGG GCCAGGACCA GGTGACGGTC
CGCAACCTGC GCATCCTCGG CATCGACAAG GACGAAAACC TGTTGGTGGT CGAAGGCGCG
GTTCCGGGAC CGAAGGACGC TACGGTGTTC ATCACCATGT CGAAGAAACC GCCGAGAGAG
CGTCGTGGAT TCGCGGGTTC GAGCACGGTT GACCCGTTGA AGGCTTCGAA GCGCGCGGTT
GCGAAGAAGA AGTAG
 
Protein sequence
MINGLIGKKI GMTQLFDSKG DVRPVTVLQA GPCVITQRKT ANKDGYDAAQ VGLVEFVKET 
RLTKAQLGHL GKNDLPPVRT LHEFAIVADG PSEAESNGEV KVGDKVLVDL FEGSKFVDVT
GVSKGRGFAG VVKRHKFAGG ARSHGSMFQI SGSIGSSAFP SRVFKGMRMA GHMGQDQVTV
RNLRILGIDK DENLLVVEGA VPGPKDATVF ITMSKKPPRE RRGFAGSSTV DPLKASKRAV
AKKK