| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1221 |
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| Symbol | rpsL |
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| ID | 4068561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1507121 |
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| End bp | 1507495 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637983230 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_590297 |
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| Protein GI | 94968249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000786754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00402882 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGCCTACAT TTAATCAACT CGTGCGTAAG GGCCGTACGG CGCCGAAGTT CAAGACGGCG
AGCCCGGCAT TGCAATCGTG CCCGCAGAAG CGTGGCGTTT GCACCCGCGT TTACACCCAG
ACGCCCAAGA AGCCGAACTC GGCGCTGCGC AAAGTTGCGC GTGTCCGCCT GACCAATGGA
ATTGAAGTGA CGACGTACAT CCCCGGCATC GGCCACAACC TGCAGGAGCA CTCGATTGTG
CTGATCCGCG GCGGCCGTGT GAAGGACCTG CCGGGCGTTC GTTATCACGT GGTACGCGGC
ACCCTGGATT CGGTGGGCGT AGCCAACCGC AAGCAGGGCC GTTCGAAGTA TGGCGCCAAG
CGCCCGAAAG CTTAA
|
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| Protein sequence | MPTFNQLVRK GRTAPKFKTA SPALQSCPQK RGVCTRVYTQ TPKKPNSALR KVARVRLTNG
IEVTTYIPGI GHNLQEHSIV LIRGGRVKDL PGVRYHVVRG TLDSVGVANR KQGRSKYGAK
RPKA
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