Gene Acid345_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1129 
Symbol 
ID4069899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1405949 
End bp1406764 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content53% 
IMG OID637983138 
ProductHNH endonuclease 
Protein accessionYP_590206 
Protein GI94968158 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000497129 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000789585 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAAGCA AACCTGGATC TATCCATCTG CGGATCATCG AAATAATGAA GCGATTCCCT 
GAGGGAGTCA CGGGAGGCCA AATTCGGCAA GAATTGGAGA AGGAAGGACT TCAAGCGGAA
GAACAAACTC ATCTAGATCG TCGTAAGCGC GATCTGAAGA AGTGGTTCGT GATCGAGAAG
CACTCGGTAA CAAGCAAGGC TCATGGAAAC AAGCGGAAAG TAACGCTCTA CAGGTACATT
AGCAAACGGT CGGTTGTTCT TGACGAAGGG CAGGTCAGCC AGCGAGAGCG CGCCGAAGTC
ATCCACTCTG CTCACGGCAA GTGTCAAATG TGCGGGCGTA CCGTTGAGAA ACACGGCATC
GCCCTAGTGG TCGATCATAA GAAGCCTCGC GACTGGGGTG GAACGAATGA ACGCGAGAAC
CTATGGGCCA TTTGTGAAGA ATGCAATGCC GGCAAAAAGG CATATTTCTC GTCTCTCAAT
GTCGACAGGG CAGTCATGAA AAAGGTGACC GCACCCGATA GTGTGCATGT CAGAATTGGG
GAACTTCTCA AGTCCGTGGG CGTCGGAAAG AGGACGCCGT CTGCACTCAT CGACGTCGTT
GCAAATCAGG ACGATTGGCA AAAGCGGCTC CGCGAGCTTC GGTACCCAGT GATTGGATGG
GAGATCGACA CGCTCCTCTA TAAAGACGAG TCCGGCAGGA AACGGTCCGA CTACATACTC
CGAAGGCACA AACCGTGGCC TCCGGACCCG AGCGGTATCA TCAGAAGATT CGAGGAGGAG
CGGAGGCGAC GCAACCGCGA TGAATCGGAA GACTAA
 
Protein sequence
MASKPGSIHL RIIEIMKRFP EGVTGGQIRQ ELEKEGLQAE EQTHLDRRKR DLKKWFVIEK 
HSVTSKAHGN KRKVTLYRYI SKRSVVLDEG QVSQRERAEV IHSAHGKCQM CGRTVEKHGI
ALVVDHKKPR DWGGTNEREN LWAICEECNA GKKAYFSSLN VDRAVMKKVT APDSVHVRIG
ELLKSVGVGK RTPSALIDVV ANQDDWQKRL RELRYPVIGW EIDTLLYKDE SGRKRSDYIL
RRHKPWPPDP SGIIRRFEEE RRRRNRDESE D