| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1092 |
|---|
| Symbol | |
|---|
| ID | 4069552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1369356 |
|---|
| End bp | 1370369 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637983101 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_590169 |
|---|
| Protein GI | 94968121 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.109622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000250734 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATAC TCTTCGGAGG CGGATCAGAA TTTCGTCGGA TTGAATATAA GAGCGAGGCT
GAATTTGAGC GCTGCATAGT CGATATTCAG CACCGATTGT TCGGTCCCTC CCGGTTCTAC
TTGGACATCA AGCGAAAAAT CGGGGTCAAA GGCGGAGTGC AGAACATTCC CGATGGCTAC
CTTCTCGACC TCTCAGGTCC GACGCCTCGA TTGTATGTGG TAGAAAACGA GCTAAAAGCA
CACGACCCGC TTCGCCACGT TGCAGTTCAG ATCCTCCAGT TCTCCATCTC GTTCGAAAGT
GAGCCGCTAG CCGTCAAAAG AATTCTGCTT TCCGCGCTGA ACGAACAACC GTCGATTCGA
GAAGCCTGTG AGAAGTACGC TCCCGCGCGG GGATACAGGA ACCTCGATCA TCTAATCGAG
TACATGGTCG CGGAATGCCC TTTTGCGGCT CTCGTGATTA TTGACGAGAT GCCGGAGTCG
CTCCAAAGCG TGCTTTCGCA AAGATTCCGG TTCGGTGTCG AAGTCTTGGA AGTCGCTTGT
TATGAGGACA AGAATGGCGG ACGACTTTTT CTGTTCGAAC CTTTCCTGGC TGATGTAGTC
GGCGATACTA CTGCAGATCA AAATGCAGAA GGGATGTCTG CGATCGATAC TTCTGAAATC
GATACTCTCG TTGTTCCGGC GCGTGAGGAT GGATTTGAAG AAGTATTTCT ACGCGAAAAC
CGCTGGTATG CAGTGCGGAT TCACGACACG ATGCGACCAC AGATCAAGTA TCTGGCGGCC
TACCAAGTGC ATCCCGTTTC GGCGATCACC TTCATCGCGC CGGTACAGTC GATTGAGCCT
TGGAAGGAGT CAGGCAAGTA TGTGCTAAAT TTCGCTGAGC CTGCACGGCC GGTCGGGCCG
CTTGCTTTAG TTAAAGGTGG CCAGGTTCGT CCGCTTCAGG GGCCACGATA TGCCACACAC
AAAGCGATTG TGGCAGCGAA GACACTCGAT GACGTATGGA AGAAGCAGCA GTAA
|
|---|
| Protein sequence | MSILFGGGSE FRRIEYKSEA EFERCIVDIQ HRLFGPSRFY LDIKRKIGVK GGVQNIPDGY
LLDLSGPTPR LYVVENELKA HDPLRHVAVQ ILQFSISFES EPLAVKRILL SALNEQPSIR
EACEKYAPAR GYRNLDHLIE YMVAECPFAA LVIIDEMPES LQSVLSQRFR FGVEVLEVAC
YEDKNGGRLF LFEPFLADVV GDTTADQNAE GMSAIDTSEI DTLVVPARED GFEEVFLREN
RWYAVRIHDT MRPQIKYLAA YQVHPVSAIT FIAPVQSIEP WKESGKYVLN FAEPARPVGP
LALVKGGQVR PLQGPRYATH KAIVAAKTLD DVWKKQQ
|
|---|
| |