| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1044 |
|---|
| Symbol | |
|---|
| ID | 4073131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1309977 |
|---|
| End bp | 1310867 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637983051 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_590121 |
|---|
| Protein GI | 94968073 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.228114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGA TTACTATCCG CAAGAAAGCC AAACAGTTTG GCAAACTCGT GCGGCACTCC
GTTGTCACCC CACGGACCGG CGTCGCCCAC CAGCCGATTC ATGCCAAGGC GCACGAACTC
GGCATCACTT TCATTGGCCA TTCCAGTTTC CTGATCCAGC TCGGCGGGAA AAACATACTG
ATCGACCCGA ACTACGCACC CTGGATCTTC GTCCTGAAAC GTTTACGCCG CGCCGGTGTT
CGCATCTCGG ACTTGCCGCC GATCGACCTG ATCCTCGTTT CGCACGCGCA CTTCGACCAT
CTACACCGTC CGTCTTTGCG GGCCATTGCC CGTTCGAACT ACCGCCGGTT CGGAAAGCGT
CCGACGATTG TCGTGCCGCA CCATGTTGAA GACCTGGTCT CCGATCTCGG CATGGAGCGC
GTCGTCGAAC TCGAGTGGTG GCAGTCGGTG AAGTTTGGCA GCGTCGAGAT CACGCATACG
CCGTCCCGAC ATTGGGGCGC GCGCATCATT CGCGATATGC ATCGCGGTTA CGGCGGTTTC
GTGCTCAAGT CCGGCCAGCA CGCGCTCTAT CACTCAGGAG ACACCGCTTA CTTCGACGGC
TTCCATGAGA TCGGCACGCG ACTGCATCCG AAGATCGCCC TGCTGCCAAT TGGTGCCTAC
CATCCTGAGT CCTTCCGCAA CGTCCATGCC AGCCCGGAAG ACGCAGTGCA GGCTTTTATC
GATCTCAAGG CCCACTGCAT GATCCCCATG CACTATGGCA CCTTTCGGCT TTCCCACGAG
CCCATGGAAG AACCGCTCGA CCGCCTTCTC TCCGACGCAG AATCGCGCGG CATCCTGAAT
AAAATGCTGG TGCTGGAAGA AGGCAAAACG AAGATTTTCG CGAAAGAATA A
|
|---|
| Protein sequence | MLKITIRKKA KQFGKLVRHS VVTPRTGVAH QPIHAKAHEL GITFIGHSSF LIQLGGKNIL
IDPNYAPWIF VLKRLRRAGV RISDLPPIDL ILVSHAHFDH LHRPSLRAIA RSNYRRFGKR
PTIVVPHHVE DLVSDLGMER VVELEWWQSV KFGSVEITHT PSRHWGARII RDMHRGYGGF
VLKSGQHALY HSGDTAYFDG FHEIGTRLHP KIALLPIGAY HPESFRNVHA SPEDAVQAFI
DLKAHCMIPM HYGTFRLSHE PMEEPLDRLL SDAESRGILN KMLVLEEGKT KIFAKE
|
|---|
| |