| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0985 |
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| Symbol | |
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| ID | 4068652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1250915 |
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| End bp | 1251814 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637982992 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_590062 |
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| Protein GI | 94968014 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000818098 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCGGAAC TCCCCGACAT CACCGCGTAC CTCACCGCGC TAGAACCGCG CGTGCTTGGC
AAAACGCTCC AGCGCGTCCG CATCACCAGC CCCTTCCTCC TCCGCACCAT CGATCCGCCG
CTGGAAGCCG TGGAAAGGAA GCGCGTGCTC GCGTTGCGGC GCATCGGCAA ACGCATCGTC
TTTGGATTGG AAGACGATCT CTGGCTGGTC TTGCACCTGA TGATCGCCGG CCGCCTTCAC
TGGAAAGCCG CGGGCGTCGC GCTGAAAGGC CGAAATTACC TTGCCGCGCT GGATTTCGAC
GACGGATCGC TGGTACTCAC CGAGGCCGGC GCGAAACGAC GCGCGTCCTT GCATCTTTTC
CGCGGCGAAG CCGCGCTGCG CACCGTGGAT CCCGGTGGAA TTGACGTCTT CACCGCCGAT
CTCGACGCAT TTCGCGCGGC GCTCACCATA GAAAACCGCA CCTTGAAGCG CGCCCTCACC
GATCCGCGCT TCCTCAGTGG CATCGGCAAC GCCTATTCCG ACGAAATCCT CTGGGCCGCG
CAGCTCTCAC CCATCGCGCA AACCCACAAG CTGAAATCCG ACGAATGGCA GCGCCTCTAC
GACGCCACCC GCGCGACGCT GCAAACCTGG ATCGACCGCT TCGCCGCCGA GGCCGCGAAG
AAATTCCCGG AGAAAGTCAC CGCGTTCCGT CCGGAGATGG CCGTCCACGG CAAGTACGGC
GAGCCCTGCC CGCGCTGCGG CGAGAAAGTC CTACGCATCC GCTACGCCGA CAACGAAACC
AACTACTGCG CGCGTTGCCA GACCGGCGGC CGCGTCCTCG CCGACCGCAG CCTATCGCGC
CTTCTCGGCT CCGATTGGCC GCGCACTCTC GACGAACTCG AGGCCCTCAA GCACCGCTAG
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| Protein sequence | MPELPDITAY LTALEPRVLG KTLQRVRITS PFLLRTIDPP LEAVERKRVL ALRRIGKRIV
FGLEDDLWLV LHLMIAGRLH WKAAGVALKG RNYLAALDFD DGSLVLTEAG AKRRASLHLF
RGEAALRTVD PGGIDVFTAD LDAFRAALTI ENRTLKRALT DPRFLSGIGN AYSDEILWAA
QLSPIAQTHK LKSDEWQRLY DATRATLQTW IDRFAAEAAK KFPEKVTAFR PEMAVHGKYG
EPCPRCGEKV LRIRYADNET NYCARCQTGG RVLADRSLSR LLGSDWPRTL DELEALKHR
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