| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0984 |
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| Symbol | |
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| ID | 4068651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1248416 |
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| End bp | 1250869 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637982991 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_590061 |
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| Protein GI | 94968013 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000176456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGGGAAG ATCTCCGCTC GGCGCTCCGC GCGATGCTGG CTAACCGCGG CTTCACCTTT
ATTGCCGTTC TCACCATCGG CATCGGCATC GGCGCCAGTA CCACCATCTT CGGCTGGATC
CGAACTGTTC TGCTCCATCC TCTCCCCGGG GCGACCAACG CCTCTCGTAT CGTCTCCCTC
GAGAACACCG CCGACGATGG CCATCCGCTG ACGACCTCGT TCCTCGATTT CACCGACTAT
CGCGACCACC TCAAGCTCGC CGACGTGACT CTGCGCAAAA TCCAGCCCCT TATCATTGGC
GAGGAGCCGA ACCCGGCGCG GGCCTGGGGT GAAGTGGTGT CCGGCAACTT CTTCCCGGTG
CTCGGCGTGC AGCCTGAAAT CGGCCGGTTT TTCTCGTCCG AAGAGAGCAC CGACGCCCAG
AATGCGCACC CGGTGGTGGT GATCAGCCAC GGCTATTGGG TCTCCCACTA CGGAAGCTCT
CCCGCGGCGA TTGGCCAGAC CCTTCACATC AACCGCACGC CGTTCACCGT CATCGGCGTC
GCCCCGCTGG CATTTCACGG CTCGTGGGCC GGGTTAGACA TGGAGATGTG GGTTCCGGTC
ACCATGTACG GCCAGCTCAC CCACACCGGC ATATGGATGC TGGAAGACCG CAAGACCCGG
AACTTCGAGA TGCTGGCACG GCTCAAGCCC GGGGTTCACC TCGCAGAAGC GAACCAGGAG
GCGCAGGCCC TCGCCGCGAA CATGGCGAAG GCCGATGCCG ACGCAGATAA CGGAGTCGGG
CTGGTTTTCA TGCCGCTCTC GAAATCGCAC TTTGGAGCGG AAGCCGTGCT CCTGAAGCCG
CTCGGTATTT TGATGGGCGC CAGTGCGTTG ATGCTCCTTA CGGTTTGCGC CAACATCGCC
AGCTTGCTTT TGGCCCGCGC TACGGCGCGC CGCAAGGAAT TCAGTATTCG TCTTGCCATG
GGAGCCCGGC CCGCACGGCT CACCCGTCAG CTTCTCACCG AAGCTCTCGC CCTCGCGCTT
GCGGGCGCGT TGCTAGGCTT GCTCCTTACG CGCTGGCTTA CCGGCGCTCT CAACTGGCTC
GCGCCCGGAA ACTCCACCCC ATTGCTCAAC GCTCACCGGT TCGATTGGGA AGTGCTGCTC
TTCAGCGCGG GATTAGCTGC CTTCGTTGCG GTGGCTGCCG GCATGGCGCC CGCACTCAGC
GCTGTGCGCG CCGACGTGAA CCAGGTTCTC AACGAAGCCC GCGGTCTGGG CACCAGCGGC
GAGTCGCATC ACTTGCGCAA GGTGTTCGTC GTGGCGGAGG TGGCGCTCGC AGTCATGGCT
CTCATCGGCG CCGGTTTGTT CGTCAAGAAT TTCCAGCGCT CCCGCCAAAT GGACCCAGGC
TTCATCGCCG AGGGCGTGGC GGTCGCCAGC TTCGATCTTT CCACAGCCGG CTACAACGCG
CGTCAGGCCG ACGACTTTTG CACTCGTCTG CGCGAGAAGC TTGAGCATAC CCCTAGTGTG
ACCGCGGTCA GCTACGACGA TTCTTTGCCC CTCGGCTCCT CCGGCGGCAA TTGGGAGGAC
CTCGAAATCC AGGGTTATGT TCCGCGTCTG AACGAGAACA TGAAGATCTA CCGCGACCTG
ATCTCGCCCG GCTTCTTCGA CCTCATGAAG ATCCCTCTCC TCGCCGGACG CGACTTCGAC
CTGCACGATT CCGCAACCCG ACTTCATGAC GATCCCATAC AGAAGGTCAT GATCGTGAAC
CAGGAATTCG TTCGCCGCTT CCTGCCCGGC CGCGATCCCC TCGGCCACAG AGTGCGCGGC
TGGGGCGAGT GGTTCACCAT CGTCGGCGTG GTACAGACGG TCAAATACCA CCAGATTACC
GAGAGTCCCG AACCTTACAT CTATGTGCCG ATCCGCCAGG TTTACCGTCC GGAATACGGG
CTGACTTTCC ATGTGCGCAC CTCCGGATCG GTTCCGGAAG CCATCGCCTC CATCCGGCGT
GAAGCGCGCC AGATCGATCC CGGCTTGCTG TTGCTCGATG CCCAACCCCT CACCGAGTAC
ATCGCCGGCT CCCTTTACGG TCAGCGAGTC GCCGCCAGCC TGCTTACCGT GCTTGGCGGG
ATCTCAATTC TTCTGGCTGC CGTCGGGCTC TATGGCCTCA TGAGCTATTC CGTCGCAGAG
CGCACCAGTG AAATCGGAAT CCGCATGACT CTTGGCGCAC AACGCGCCAC CGTCATGTCG
ATGGTTCTAA AACAGGGCTT GGTGATGGCT TTGCTTGGAC TCGCGATCGG GACAGTCGCG
TCGCTGGCCG CGGCGCGCCT GGTCTCCGCT GCGCTCGGCG CCATCAGTCC GGCGGATCCC
GCGGTTTACC TCGCCGCCGT TGCCTTCACC ATCATGATGG CCCTACTTTC GGTCGCTATC
CCTGCATGGC GAGCCATGCG CGTCGATCCT ATGGTGGCGC TGCGCTATCA GTGA
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| Protein sequence | MREDLRSALR AMLANRGFTF IAVLTIGIGI GASTTIFGWI RTVLLHPLPG ATNASRIVSL
ENTADDGHPL TTSFLDFTDY RDHLKLADVT LRKIQPLIIG EEPNPARAWG EVVSGNFFPV
LGVQPEIGRF FSSEESTDAQ NAHPVVVISH GYWVSHYGSS PAAIGQTLHI NRTPFTVIGV
APLAFHGSWA GLDMEMWVPV TMYGQLTHTG IWMLEDRKTR NFEMLARLKP GVHLAEANQE
AQALAANMAK ADADADNGVG LVFMPLSKSH FGAEAVLLKP LGILMGASAL MLLTVCANIA
SLLLARATAR RKEFSIRLAM GARPARLTRQ LLTEALALAL AGALLGLLLT RWLTGALNWL
APGNSTPLLN AHRFDWEVLL FSAGLAAFVA VAAGMAPALS AVRADVNQVL NEARGLGTSG
ESHHLRKVFV VAEVALAVMA LIGAGLFVKN FQRSRQMDPG FIAEGVAVAS FDLSTAGYNA
RQADDFCTRL REKLEHTPSV TAVSYDDSLP LGSSGGNWED LEIQGYVPRL NENMKIYRDL
ISPGFFDLMK IPLLAGRDFD LHDSATRLHD DPIQKVMIVN QEFVRRFLPG RDPLGHRVRG
WGEWFTIVGV VQTVKYHQIT ESPEPYIYVP IRQVYRPEYG LTFHVRTSGS VPEAIASIRR
EARQIDPGLL LLDAQPLTEY IAGSLYGQRV AASLLTVLGG ISILLAAVGL YGLMSYSVAE
RTSEIGIRMT LGAQRATVMS MVLKQGLVMA LLGLAIGTVA SLAAARLVSA ALGAISPADP
AVYLAAVAFT IMMALLSVAI PAWRAMRVDP MVALRYQ
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