| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0971 |
|---|
| Symbol | |
|---|
| ID | 4072959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 1230248 |
|---|
| End bp | 1232248 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637982978 |
|---|
| Product | amidohydrolase 3 |
|---|
| Protein accession | YP_590048 |
|---|
| Protein GI | 94968000 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.59323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0406107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTG CTCGTTTTCT CCTGGTGTGC TTTTTCCTCT CTGGCGCGAT CGTGTTGGCG
CAGCAGACTG CCACCTCCGG CAGTTTCGTC CTGCATAAGT TCGCTCGTCC CATCGGCAGT
GAGACCTATT CCATCGCCAC GGACAAAGAC AGCTACACGC TGACTTCACA TTTTCTGTTT
ACGGATCGCG GTACGAAGGT CCCGCTGGAG ACTACGTTTG TCGCCGGCAC GCGCGACATG
GCGCCGCGCT CGTTCAGCGC GAAGGGCAAG CCCTCGCGTC AGGCTGAGAT GGATGACTCG
GTTACAGTGG CGGGCGACAC CGTATCCATC ACGCGTAGCG GCAAATCCGA GACGCAAAAA
GCCGACAAAT CATGGTTCGT TGTGGACGGA TATTCACCGG TGGCGATGCA GGAACAGATG
ATGCGCTGGT GGCTGAAGCA TGGAAAGCCA CAGGAGTTCA CTGCTTATCC ATCGAAGGCG
ACGGTTCGTA TCACCCCTGC GGGAACGCTG GCAATCGACG GTAAGGCGAC GCACGGATAC
ACGGTAAGTG GCTTGATCTG GGGACAGGAA TCGTTGTGGA TGGACGACGC GCAGAACCTG
GTCGCGCTGG TCAGCATCGA TGCGGAATTC GATCACTTCG AAGCCGTCCG CGAGAAGTAT
GCGAAGAGCC TCAATCTGTT TATTGCGGAC GCGGTGAAGG CCGATCTTGC GAATTTGAAG
AAGCTGAGTG CGACCGCGCG CATGGCTCCA TCACGGCGGC TCGCTATCGT CGGCGCGACG
ATCGAAGACT CGATTGCGCC GCCGATCCAA AATGGCGTGA TCTTGATCGA AGATGGAGTT
ATTCGAGCTG TGGGCCCGAA AGACCAGGTC ACGATACCCA GCGATGCGAA AGTGCTAGAC
GCCACCGGCA AGTTCGCAGT CCCGGGACTG TGGGACATGC ATGCTCACTA CGAACAGGTG
GAGTGGGGAC CGATTTACCT TGCCGCTGGC GTGACCACGG TCCGCGACGT CGGGAATGAG
TTTGAGTTTA TCCAGACACT TCATGACGAA CTTGATCGCA AGCAGGATCC CGCGATTGGT
CCGCACCTTG AATTTGCGGG CGTGATTGAC GGATCGGGAC AATTGACGAT CGGCGTGACC
ATTGCCGACA CGCCCGAGCA GGCGCGGGAA TGGGTGGACA AATATGCATC TGCGGGTGCA
AGGCAAATCA AGATCTACAG CTCAGTGAAG CCGGAGATCG TGAAGGCGAT TACCACCGAA
GCACACGCAA AAGGGATGAC CGTAACTGGC CATATCCCTG AAGGAATGAC GGCGATTCAG
GGCATCCACC TTGGAATGGA CCAGATCAAT CACATCAGCT ACGAACTGCA GTACTCGACC
CGTCCCATCT TCGGCGCTGA TGGCAAACCG GACCGTTCCA AGCCGGCGGT GCTCGAATTG
GAAGGGGCGC GGATGAAGGA CCTGGTCTCG ACCTTGCAAG CACACCACAC CGTCCTCGAC
CCGACGGCGG CGTTGTATGA GAGCTTCTCG ATTACGGTGC CGCTCCACGA AGTTGAGCCG
GGCGTCGACC ACCTTCCACC ACAATTGCGC GAGGCTTTGG ATAGTCCGCC GCCAACTGGA
GACCGCGCCG CAATTGCCGA TGCGCGAAGG AAGGCGATTA TCGCCACGCT GCGCGCGCTT
CACGAAGCAA AGGTCCCGAT CGTCGCCGGA ACCGACCAAG CCATTCCTGG ATATTCCCTG
CACCGCGAGC TGGAACTGTA CGTGGAGGCC GGCTTCACTC CGCAGGAAGC GATCCAGGCT
GCAACTATTG AGGCGGCGAG GGCCGTGGGC GTGGAGAAAG AGTCGGGTTC ACTGGAAGCC
GGAAAACGCG GCGACGTTCT GCTGCTGAAC GCCGACCCGC TCGCCGACAT TCACAACACA
CGTAAAGTCT GGCGAACGGT GGCGGCTGGC GCAGTGTACG ATCCGGCGCC GCTGTGGCAG
GTGGTAGGGT TCCTGCCGTA A
|
|---|
| Protein sequence | MRFARFLLVC FFLSGAIVLA QQTATSGSFV LHKFARPIGS ETYSIATDKD SYTLTSHFLF
TDRGTKVPLE TTFVAGTRDM APRSFSAKGK PSRQAEMDDS VTVAGDTVSI TRSGKSETQK
ADKSWFVVDG YSPVAMQEQM MRWWLKHGKP QEFTAYPSKA TVRITPAGTL AIDGKATHGY
TVSGLIWGQE SLWMDDAQNL VALVSIDAEF DHFEAVREKY AKSLNLFIAD AVKADLANLK
KLSATARMAP SRRLAIVGAT IEDSIAPPIQ NGVILIEDGV IRAVGPKDQV TIPSDAKVLD
ATGKFAVPGL WDMHAHYEQV EWGPIYLAAG VTTVRDVGNE FEFIQTLHDE LDRKQDPAIG
PHLEFAGVID GSGQLTIGVT IADTPEQARE WVDKYASAGA RQIKIYSSVK PEIVKAITTE
AHAKGMTVTG HIPEGMTAIQ GIHLGMDQIN HISYELQYST RPIFGADGKP DRSKPAVLEL
EGARMKDLVS TLQAHHTVLD PTAALYESFS ITVPLHEVEP GVDHLPPQLR EALDSPPPTG
DRAAIADARR KAIIATLRAL HEAKVPIVAG TDQAIPGYSL HRELELYVEA GFTPQEAIQA
ATIEAARAVG VEKESGSLEA GKRGDVLLLN ADPLADIHNT RKVWRTVAAG AVYDPAPLWQ
VVGFLP
|
|---|
| |