| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0924 |
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| Symbol | |
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| ID | 4070576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1169231 |
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| End bp | 1169914 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982931 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_590001 |
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| Protein GI | 94967953 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00107635 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGGCG AGCCGCGGTT GGTGGAAGTA CGGAAGAACA TCCTAAAGCA GAACGACATT
GTGGCAAGCG CGCTGCGCGA GCGGTTCCGA GAGTCGGGGG TGTTCGTGGT GAGCATGGTT
TCGAGCCCGG GATCGGGAAA GACTGCGTTG CTGGAGAAAA CGTTGAAGCT CCTCTCGAAG
AACTTCCGAG TTGCGGCGCT CGTCGGCGAC CTGGCTACCG AGAACGATGC ACACCGACTA
GCGCGAAGTG GAGCGCCGGT GAAGCAGATC GTGACCGGAA CGGTTTGCCA TCTTGAAGCG
GCGATGGTGG AGAAGGCGCT GGAGGGGTGG AATCCGGATG AGCTGGATTT TCTGTTTGTG
GAGAACGTCG GCAATCTTGT GTGTCCGTCT TCCTATGACT TGGGAGAAAA CCTGCGTCTG
GTGCTCTCGT CGGTGACGGA AGGCGAAGAC AAGCCGTTGA AGTATCCGAC GATCTTTAAC
AGCGCAGACG TGGCGGTGAT TACGAAGATG GACCTTGCGG CGGCAGTTGA GTTCGATGAG
ACGACATCTG TGCAGAATAT CCTTGCCGTG CGACCGGGGA TGGAGATATT CAAGGTGTCG
GCGAAAACGG GCGCGGGGAT GGATGAGTTC CTGGAATTCC TGCAGGCGCG TTTGAACGAA
ACGAAGGTAG CGAAGACGAT TTGA
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| Protein sequence | MSGEPRLVEV RKNILKQNDI VASALRERFR ESGVFVVSMV SSPGSGKTAL LEKTLKLLSK
NFRVAALVGD LATENDAHRL ARSGAPVKQI VTGTVCHLEA AMVEKALEGW NPDELDFLFV
ENVGNLVCPS SYDLGENLRL VLSSVTEGED KPLKYPTIFN SADVAVITKM DLAAAVEFDE
TTSVQNILAV RPGMEIFKVS AKTGAGMDEF LEFLQARLNE TKVAKTI
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