| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0907 |
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| Symbol | |
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| ID | 4069118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1136677 |
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| End bp | 1137735 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637982914 |
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| Product | ABC sugar transporter, periplasmic binding protein |
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| Protein accession | YP_589984 |
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| Protein GI | 94967936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.40288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0322478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACT TCATCCTCTT ACTCTGTATA GTGGCTCTGC TCGAATTCTC AACATCCTGC
CACCGTGGGC ATGAAGAGGC GCGGCAATCT CGCGGCAAGG GCCCGGTGAA GATTGGATTG
TCGCTCGACT CGCTGCAATT GGAACGCTGG CAACATGATC GGGATGCCTT CGTGGCGAAA
GCCAGCCAAC TCGGAGCCGA AGTATTCATA CAATCCGCCA ACGGAGTGGA TGCTGTCCAG
ATCCGACAGT GCGAAAACTT GCTGACGATG GGCGTCGATG TTCTTGTCAT AGTGCCGCAT
AACGGCGAAG TCATGGCATC GGCGGTGCGC AGTGCTGAGG CGCAGGGCGT GCCCGTGATC
TCGTATGACC GACTGATTCG CGATTCGAAT GTGAGTCTGT ATGTCTCATT CGACAACAAG
CTGATTGGTG AGTTACAGGC GAAATACCTC TACGCCCGCG CACCAGCGGG CAATTACATT
CTTATCGGCG GTTCACCAAC GGATAACAAC GCTCACTTAA TTCGCGAAGG CCAAATGCAG
GTTCTTAGTC CCGCCATCAA GCGCGGCGAC ATTCGCATCA TCGCGGACCA ATGGGCCAAA
GACTGGCTGC CTAGTGAAGC TCTGCGTCAC ACCGAAAACG CTCTCACGCA GGCAAATAAT
CATGTCGCCG CGGTGGTGAC TTCAAATGAC AGCACCGCCG GTGGCGCCAT TCAGGCGCTT
GGAGAACAGG GCTTGGCGGG GAGAGTGCTT GTATCGGGTC AAGACACCGA CCTCGCGGCC
GCGCAGCGCG TCGTCGAGGG CACGCAGTCG ATGACCGTGT ACAAGCCGAT CAAGCCCCTC
GCAGAAAATG CAGCAGCGGC GGCGGTAGCG CTTGCGCGTG GCGAGAAGGT CCAGTCAAAT
TCGAACGTTA ACAACGGCGC GAAAGAAGTT CCTTCAATTC TTCTCGCGCC GATTGTTGTT
GATCGCACGA ACATCGATTC TACTGTCATT AAAGACGGCT TCTTGAAGCG CGAAGACATA
TACAAAAATG TCTCGCGCAC GCAGTGGCCG AAGGACTAG
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| Protein sequence | MRNFILLLCI VALLEFSTSC HRGHEEARQS RGKGPVKIGL SLDSLQLERW QHDRDAFVAK
ASQLGAEVFI QSANGVDAVQ IRQCENLLTM GVDVLVIVPH NGEVMASAVR SAEAQGVPVI
SYDRLIRDSN VSLYVSFDNK LIGELQAKYL YARAPAGNYI LIGGSPTDNN AHLIREGQMQ
VLSPAIKRGD IRIIADQWAK DWLPSEALRH TENALTQANN HVAAVVTSND STAGGAIQAL
GEQGLAGRVL VSGQDTDLAA AQRVVEGTQS MTVYKPIKPL AENAAAAAVA LARGEKVQSN
SNVNNGAKEV PSILLAPIVV DRTNIDSTVI KDGFLKREDI YKNVSRTQWP KD
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