Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0859 |
Symbol | |
ID | 4068953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1069641 |
End bp | 1071545 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637982868 |
Product | AAA ATPase |
Protein accession | YP_589938 |
Protein GI | 94967890 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCG CGACTGCCAT GAGTTGGACC GAAGCCAATC ACACGTACCT CGTGGCCGAA TTCGCGCGCC TCAAAGAGCG GCTTGGCATG ACCGCAATGC TGGCTTCGGG TATCCCGGAG CCCCAAGACT CGCCGTTTGC AATCGACCGC CTTACCGCGA TGTTCGGGCT AACCGACTTC GAGCGCGACC TCCTGTTGCT TTGTGCCGGG GTCGAAATGG ATTCTGAATT GGCGGCGCGC TGCGCCGAGA TGCACCAGTT GTCTCAAAGG CCCTACGTTA CCTTCGGCCT CGCGATGTCG CTCTTGGAAA ATCCTCACTG GAGCGCATTC ACGCCCGTAC GGCCCCTGCG GCGCTTTCAC CTTGTGGAGT TGAGCAATAG CGGCGGATTT GCCACCGCGC CGGTTCGCAT CGATGAACGA GTGCTTCATT ACCTCGCGGG GATGCATGTC CCCGATCCCT CGCTCAACTC GCTCATCACA CCGATTGCCG GCGCTCCCCT CGTTGCAGAG GAGCATAGAA ATACGGCCAC ATCCATCGCG CGAATATTGC GCGAAGCGTC CCAAGTCGCT CCGGTCCTCC ACCTTTGCGG AGATGACGCA TTTGGCCAGG AAGACGTCGC GGCCCTCGTC ACGCAAGCCC TCGGGTTGGA ACTTTTCTCA ATTCGCCTCG AAGATCTTCC CGGTTCAACT CAGGATCTTG AGCGGCTTGT TTGGCTCCTC GAACGTGAGG CGCTCTTGCT TCCCGCTACT TTCCTGTTGC AATGCGGAAA TTCGAGCATG ACAGCCGCAG CCAACTATCT CGCCGACAAG TTGCCTTTCT CATTCTTCCT CGCCACGCAA GAACCTGTTC GGCTTCACCG TGCATATGCT CGCTTCGATG TAAACAAGCC TGCTGCTCGC GAACAGCATG ACCTCTGGGT CCGTGCTCTC AATGGCGCTG CTTCCAACAT GAACGGCGGC CTTGCCAGGA TCTCGCAGCA ATTTCGGCTG AGCGCTCGGA TGATCTATCA CACCGGTATG TTGGCCTCGA CCAACTCCGC GGAGCTCAAT CCTGACACGC TGTGGAAGGC TTGCCGATCG TTAGCTCGAC CGAAGTTGGA AGATCTCGCA CAACGGATTA GTCCGGCAGC CACCTGGGGC GACATCGTAC TGCCCGAGCT CCAGATGCGC ATGCTGCGAC ATATGTCGAC CCAGGCCTGG CATCGCATGC GTGTCCATGA GCACTGGGGT TTCGCCGGAA AGGGCAAACG GGGCCTAGGC GTCAGTGCGC TTTTCTGCGG TGAGTCTGGC ACTGGCAAAA CCCTTGCCGC CGAAGTCTTG GCGTCCGAGC TCGGACTCGA TCTTTATCGC ATCGATCTCG CGTCGGTCGT GAGTAAGTAC ATCGGAGAAA CGGAAAAAAA CCTCAAGATC ATCTTCGACG CTGCCGAAGA AGGCGGGGTT TTGCTGCTCT TCGACGAAGC CGATGCCCTC TTTGGAAAAC GCGGAGAGGT GAAGGATAGT CACGACCGCT ACGCCAACAT CGAGGTGGGC TACCTGCTCC AGCGAATGGA GTCCTATGCC GGGCTGGCAG TTCTCACCAC GAATTTGAAG GCTTCCCTCG ACCGCGCATT TCAACGACGT CTCCGCTTCA CCATAACGTT CCCCTTTCCC GATGCAGCGC AACGCGAAGC GATTTGGGCG AAGGTATTTC CATCTTCCAC CCCGACGCGC GGACTGGATA TGAAGAAGCT CTCACAGCTC AACGTAGCCG GCGGAAACAT TCGCAATATC GCACTGAACG CGGCATTCCT TGCGGCCGAC TGCGACGGCC CCGTGGGCAT GGAGCACCTC CTTGAGGCCG CAAAACTCGA AGCCCACAAG ATCGAGCGTC CACTTGCAGG TGCAGAACTG CGTGGCTGGG TATGA
|
Protein sequence | MSTATAMSWT EANHTYLVAE FARLKERLGM TAMLASGIPE PQDSPFAIDR LTAMFGLTDF ERDLLLLCAG VEMDSELAAR CAEMHQLSQR PYVTFGLAMS LLENPHWSAF TPVRPLRRFH LVELSNSGGF ATAPVRIDER VLHYLAGMHV PDPSLNSLIT PIAGAPLVAE EHRNTATSIA RILREASQVA PVLHLCGDDA FGQEDVAALV TQALGLELFS IRLEDLPGST QDLERLVWLL EREALLLPAT FLLQCGNSSM TAAANYLADK LPFSFFLATQ EPVRLHRAYA RFDVNKPAAR EQHDLWVRAL NGAASNMNGG LARISQQFRL SARMIYHTGM LASTNSAELN PDTLWKACRS LARPKLEDLA QRISPAATWG DIVLPELQMR MLRHMSTQAW HRMRVHEHWG FAGKGKRGLG VSALFCGESG TGKTLAAEVL ASELGLDLYR IDLASVVSKY IGETEKNLKI IFDAAEEGGV LLLFDEADAL FGKRGEVKDS HDRYANIEVG YLLQRMESYA GLAVLTTNLK ASLDRAFQRR LRFTITFPFP DAAQREAIWA KVFPSSTPTR GLDMKKLSQL NVAGGNIRNI ALNAAFLAAD CDGPVGMEHL LEAAKLEAHK IERPLAGAEL RGWV
|
| |