Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0757 |
Symbol | |
ID | 4068633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 934889 |
End bp | 935557 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637982763 |
Product | TPR repeat-containing protein |
Protein accession | YP_589836 |
Protein GI | 94967788 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.572611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG CATCTGCGCA AGCACAACCG CCCACCAATC TCTGGACCGC CTCGCAGGCG TATGTCCTCG CCGCCATCAC ACTCGTCGTT GGAATCGGGA TCGGCTGGCT CGTCCACGGT TCCTACTCCG ACAGTCAACA ACAACGAACA ACAACCGCCG CGAGCGCTCC TGCCCCAAGC GCCCCGAGTA CCGGCGGGTT CCAGGTGCCG ACGTTTAACG GACAACCGGG ACGCCTGTCA CTGGACGACA TCAACAAAGC TGCGGCGCCG ATGATCGCGC AATTGCAGCA ACGCCCGAAC GATCCAGATC TGTTGGCGAA GCTCGGCAAT CACTACTACG ACAGCCAGGC ATTCCCACAG GCGATTGCGT ACTACCAGAA ATCGCTGGCG ATCGCGCCGT CGAATCCCGA CGTCCGCACT GACATGGGGA CCGCCATGTT CTACAACGGC GACCCGGACG GTGCTCTGAA GGAATTCGCG ACTTCACTTT CGTACGCACC GACGCACGCC GAGACCATGT TCAACCGCGG CGTGGTGCTG ATGCAGGGCA AGAACGACCC GAAGGCAGCG ATTGCGAGTT GGCAGGAGTT GTTGAAGACC AACCCGAATT ATCAGGACCG CCCGAAGGTC GAGGCGTCGA TCGCGGACGC GCAGAAGCGC GTGAAGTAG
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Protein sequence | MAKASAQAQP PTNLWTASQA YVLAAITLVV GIGIGWLVHG SYSDSQQQRT TTAASAPAPS APSTGGFQVP TFNGQPGRLS LDDINKAAAP MIAQLQQRPN DPDLLAKLGN HYYDSQAFPQ AIAYYQKSLA IAPSNPDVRT DMGTAMFYNG DPDGALKEFA TSLSYAPTHA ETMFNRGVVL MQGKNDPKAA IASWQELLKT NPNYQDRPKV EASIADAQKR VK
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